RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 KCNK17Q96T54 332 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 VKORC1Q9BQB6 163 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 PRDM14Q9GZV8 571 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 LAT2Q9GZY6 243 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 TP63Q9H3D4 680 aaPredicted RBP7.1□□□□□ -1.27
SSR1-210ENST00000489567 RAD21L1Q9H4I0 556 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 TMEM38AQ9H6F2 299 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 THUMPD1Q9NXG2 353 aaKnown RBP7.1□□□□□ -1.27
SSR1-210ENST00000489567 GMPR2Q9P2T1 348 aaKnown RBP7.1□□□□□ -1.27
SSR1-210ENST00000489567 USP22Q9UPT9 525 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 CAMK2AQ9UQM7 478 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 RRP15Q9Y3B9 282 aaKnown RBP7.1□□□□□ -1.27
SSR1-210ENST00000489567 FLNCQ14315 2725 aa7.1□□□□□ -1.27
SSR1-210ENST00000489567 KIAA1549Q9HCM3 1950 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 H3BML4 177 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 AP3D1O14617 1153 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 AIM2O14862 343 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 DNAJA2O60884 412 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 GCM2O75603 506 aaPredicted RBP7.09□□□□□ -1.27
SSR1-210ENST00000489567 NUDT14O95848 222 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 ACTL6AO96019 429 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 OPN1LWP04000 364 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 NID1P14543 1247 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 IL7RP16871 459 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 ZNF708P17019 499 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 CHMP24386 653 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 SHC1P29353 583 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 AQP1P29972 269 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 CCR4P51679 360 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 SUCLG1P53597 346 aaKnown RBP7.09□□□□□ -1.27
SSR1-210ENST00000489567 CASP6P55212 293 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 CLDN20P56880 219 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 EEF1A1P68104 462 aaKnown RBP7.09□□□□□ -1.27
SSR1-210ENST00000489567 CDK6Q00534 326 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 FOXF1Q12946 379 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 RPTNQ6XPR3 784 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 ZNF836Q6ZNA1 936 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 CLIP4Q8N3C7 705 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 OR52P1PQ8NH57 321 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 OR5W2Q8NH69 310 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 OR10A6Q8NH74 314 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 SSC4DQ8WTU2 575 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 WDR60Q8WVS4 1066 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 BCL2L10Q9HD36 194 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 DNAJB12Q9NXW2 375 aaKnown RBP7.09□□□□□ -1.27
SSR1-210ENST00000489567 CALML5Q9NZT1 146 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 SUCOQ9UBS9 1254 aaKnown RBP7.09□□□□□ -1.27
SSR1-210ENST00000489567 CORO2BQ9UQ03 480 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 ARL2BPQ9Y2Y0 163 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 MYO18BQ8IUG5 2567 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 MYO7BQ6PIF6 2116 aa7.09□□□□□ -1.27
SSR1-210ENST00000489567 A0A0G2JPF8 293 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 FIGNL2A6NMB9 653 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 HNRNPCL2B2RXH8 293 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 HNRNPCL3B7ZW38 293 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 EIF4E2O60573 245 aaKnown RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 HNRNPCL1O60812 293 aaKnown RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 WDR1O75083 606 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 MTRF1O75570 445 aaKnown RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 TOXO94900 526 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 NTN1O95631 604 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 EPPINO95925 133 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 FAM107AO95990 144 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 DBIP07108 87 aaKnown RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 GKN3PP0CG01 181 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 HNRNPCL4P0DMR1 293 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 GLI4P10075 376 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 ESRRAP11474 423 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 PRG2P13727 222 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 CPN1P15169 458 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 PRKCAP17252 672 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 ATF4P18848 351 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 SLC6A2P23975 617 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 RYKP34925 604 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 ZNF41P51814 821 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 SUMO3P55854 103 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 NUP107P57740 925 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 PMPCAQ10713 525 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 SCARB2Q14108 478 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 QPRTQ15274 297 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 FXNQ16595 210 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 CYP51A1Q16850 503 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 GLYR1Q49A26 553 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 ACSF3Q4G176 576 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 DMRTA1Q5VZB9 504 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 AAGABQ6PD74 315 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 NET1Q7Z628 596 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 GGNQ86UU5 652 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 CALHM3Q86XJ0 350 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 PEX5LQ8IYB4 626 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 ZZZ3Q8IYH5 903 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 UBQLNLQ8IYU4 475 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 GTPBP8Q8N3Z3 284 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 FBXO27Q8NI29 283 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 ITLN2Q8WWU7 325 aaPredicted RBP7.09□□□□□ -1.28
SSR1-210ENST00000489567 OIT3Q8WWZ8 545 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 SMPDL3BQ92485 455 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 TUBA1CQ9BQE3 449 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 PIGQQ9BRB3 760 aa7.09□□□□□ -1.28
SSR1-210ENST00000489567 GPATCH1Q9BRR8 931 aaKnown RBP7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms