RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 CCDC28BQ9BUN5 200 aa17.05■□□□□ 0.32
MRPL55-230ENST00000489430 PRRG4Q9BZD6 226 aa17.05■□□□□ 0.32
MRPL55-230ENST00000489430 TCF7L2Q9NQB0 619 aa17.05■□□□□ 0.32
MRPL55-230ENST00000489430 EXOSC3Q9NQT5 275 aaKnown RBP17.05■□□□□ 0.32
MRPL55-230ENST00000489430 RASSF1Q9NS23 344 aa17.05■□□□□ 0.32
MRPL55-230ENST00000489430 THUMPD1Q9NXG2 353 aaKnown RBP17.05■□□□□ 0.32
MRPL55-230ENST00000489430 EDARQ9UNE0 448 aa17.05■□□□□ 0.32
MRPL55-230ENST00000489430 EMC9Q9Y3B6 208 aa17.05■□□□□ 0.32
MRPL55-230ENST00000489430 OTOGQ6ZRI0 2925 aa17.05■□□□□ 0.32
MRPL55-230ENST00000489430 KIAA1549Q9HCM3 1950 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 A0A0J9YW62 118 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 FAM234BA2RU67 622 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 POLR3GO15318 223 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-230ENST00000489430 AQP8O94778 261 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 CGAP01215 116 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 PGCP20142 388 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 POLR2JP52435 117 aaKnown RBP17.04■□□□□ 0.32
MRPL55-230ENST00000489430 CARD18P57730 90 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 PPP2R2AP63151 447 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 FUT5Q11128 374 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 QPRTQ15274 297 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 LRRC74BQ6ZQY2 392 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 BTLAQ7Z6A9 289 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 TMCO5AQ8N6Q1 288 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 CPNE4Q96A23 557 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-230ENST00000489430 KLHDC3Q9BQ90 382 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 MTHFD2LQ9H903 347 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-230ENST00000489430 GP6Q9HCN6 339 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-230ENST00000489430 INTS9Q9NV88 658 aaKnown RBP17.04■□□□□ 0.32
MRPL55-230ENST00000489430 NDRG3Q9UGV2 375 aa17.04■□□□□ 0.32
MRPL55-230ENST00000489430 NUP214P35658 2090 aaPredicted RBP17.04■□□□□ 0.32
MRPL55-230ENST00000489430 C9JVG2 144 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 TNFSF11O14788 317 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 CXCL13O43927 109 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 SS18L1O75177 396 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-230ENST00000489430 SMNDC1O75940 238 aaKnown RBP eCLIP17.03■□□□□ 0.32
MRPL55-230ENST00000489430 H6PDO95479 791 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 NID1P14543 1247 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 FKBP2P26885 142 aaKnown RBP17.03■□□□□ 0.32
MRPL55-230ENST00000489430 PGM1P36871 562 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 CDKN2CP42773 168 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 CASP9P55211 416 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 STX1BP61266 288 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 GNA13Q14344 377 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 TOMM34Q15785 309 aaPredicted RBP17.03■□□□□ 0.32
MRPL55-230ENST00000489430 MAPK14Q16539 360 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 GPAT3Q53EU6 434 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 VWA1Q6PCB0 445 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 OR6K3Q8NGY3 331 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 ZFP90Q8TF47 636 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 OSTF1Q92882 214 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 TMEM185BQ9H7F4 350 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 SLCO1B3Q9NPD5 702 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 PLSCR4Q9NRQ2 329 aa17.03■□□□□ 0.32
MRPL55-230ENST00000489430 DNAJB12Q9NXW2 375 aaKnown RBP17.03■□□□□ 0.32
MRPL55-230ENST00000489430 PRAMEF27A3QJZ7 478 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 AGAP5A6NIR3 686 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 EFNA2O43921 213 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 PLGP00747 810 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 UBTFL6P0CB48 400 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 CD79BP40259 229 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 SLC6A8P48029 635 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 IDH3AP50213 366 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 CCR4P51679 360 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 KCNJ10P78508 379 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 CHRNEQ04844 493 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 SNTB1Q13884 538 aaKnown RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 RNPS1Q15287 305 aaKnown RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 NDUFAF6Q330K2 333 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 C3orf33Q6P1S2 294 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 REXO5Q96IC2 774 aaKnown RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 THUMPD3Q9BV44 507 aaKnown RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 POLDIP3Q9BY77 421 aaKnown RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 SLC38A1Q9H2H9 487 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 CLEC4MQ9H2X3 399 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-230ENST00000489430 FANCFQ9NPI8 374 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 SERINC1Q9NRX5 453 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 ACER3Q9NUN7 267 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 CALML5Q9NZT1 146 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 PROCRQ9UNN8 238 aa17.02■□□□□ 0.32
MRPL55-230ENST00000489430 POLQO75417 2590 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 CENPVL1A0A0U1RR11 272 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 ANP32DO95626 131 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 GSNP06396 782 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 SFTPDP35247 375 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 MVDP53602 400 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 CTBP2P56545 445 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 RAC3P60763 192 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 ZNF239Q16600 458 aaKnown RBP17.01■□□□□ 0.31
MRPL55-230ENST00000489430 TMEM176BQ3YBM2 270 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-230ENST00000489430 TIGD2Q4W5G0 525 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 ZNF474Q6S9Z5 364 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-230ENST00000489430 SLC43A2Q8N370 569 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 RFWD2Q8NHY2 731 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 LINC01560Q8TB33 94 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 RNF128Q8TEB7 428 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 SLC25A43Q8WUT9 341 aaPredicted RBP17.01■□□□□ 0.31
MRPL55-230ENST00000489430 NINJ1Q92982 152 aa17.01■□□□□ 0.31
MRPL55-230ENST00000489430 ZG16BQ96DA0 208 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms