RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 CMIPQ8IY22 773 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 PEX5LQ8IYB4 626 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 CNEP1R1Q8N9A8 125 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 ACBD4Q8NC06 268 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 OR2V1Q8NHB1 315 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF563Q8TA94 476 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 POC1BQ8TC44 478 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 ST8SIA1Q92185 356 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 FIG4Q92562 907 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 C14orf79Q96F83 325 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 REXO5Q96IC2 774 aaKnown RBP12.85□□□□□ -0.35
BRCA1-218ENST00000489037 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF559Q9BR84 538 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 TMEM185BQ9H7F4 350 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 SERINC1Q9NRX5 453 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 KCNE5Q9UJ90 142 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 PCDHB14Q9Y5E9 798 aa12.85□□□□□ -0.35
BRCA1-218ENST00000489037 ITPR2Q14571 2701 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 TNFSF11O14788 317 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 OPN1LWP04000 364 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 DBIP07108 87 aaKnown RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 VIMP08670 466 aaKnown RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 PABPC4LP0CB38 370 aaKnown RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 ETFAP13804 333 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 PRF1P14222 555 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 UQCRBP14927 111 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 IGFBP2P18065 325 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 PSMA4P25789 261 aaKnown RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 SFTPDP35247 375 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 KIR2DL3P43628 341 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 CARD18P57730 90 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 FUT5Q11128 374 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 SELENBP1Q13228 472 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 SKP2Q13309 424 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 MAPK14Q16539 360 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 METTL21CQ5VZV1 264 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 GGNQ86UU5 652 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 FUNDC1Q8IVP5 155 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 ATP6V1C2Q8NEY4 427 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 OR10D3Q8NH80 312 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 FNDC9Q8TBE3 224 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 WDR60Q8WVS4 1066 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 OSTF1Q92882 214 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 TREX2Q9BQ50 279 aaPredicted RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 TRIM8Q9BZR9 551 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 PAIP1Q9H074 479 aaKnown RBP12.84□□□□□ -0.35
BRCA1-218ENST00000489037 SLC38A1Q9H2H9 487 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 SLC6A13Q9NSD5 602 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 MRGBPQ9NV56 204 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 PACSIN3Q9UKS6 424 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 ZNF232Q9UNY5 417 aa12.84□□□□□ -0.35
BRCA1-218ENST00000489037 CREBBPQ92793 2442 aa12.83□□□□□ -0.35
BRCA1-218ENST00000489037 CELSR2Q9HCU4 2923 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 A0A1W2PNV4 684 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 PRAMEF27A3QJZ7 478 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 AGAP5A6NIR3 686 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 EVPLLA8MZ36 301 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 C5orf58C9J3I9 102 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 ADAMDEC1O15204 470 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 ATP8B1O43520 1251 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 CXCL13O43927 109 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 SMNDC1O75940 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 C1QCP02747 245 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 BCHEP06276 602 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 CHRM4P08173 479 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 SLC7A1P30825 629 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 RYKP34925 604 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 PGM1P36871 562 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 CTBP2P56545 445 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 SIRPAP78324 504 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 TLE4Q04727 773 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 FADDQ13158 208 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 TOMM34Q15785 309 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 TMEM176BQ3YBM2 270 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 GTDC1Q4AE62 458 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 SLC25A53Q5H9E4 307 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 LUZP2Q86TE4 346 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 ZG16BQ96DA0 208 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 AURKBQ96GD4 344 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 NPAS1Q99742 590 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 KLHDC3Q9BQ90 382 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 RBM24Q9BX46 236 aaKnown RBP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 ARMC7Q9H6L4 198 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 RNF122Q9H9V4 155 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 EXOSC3Q9NQT5 275 aaKnown RBP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 GLRX2Q9NS18 164 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 ACER3Q9NUN7 267 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 LEF1Q9UJU2 399 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 CORO2BQ9UQ03 480 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 EMC9Q9Y3B6 208 aa12.83□□□□□ -0.36
BRCA1-218ENST00000489037 SPIN1Q9Y657 262 aaPredicted RBP12.83□□□□□ -0.36
BRCA1-218ENST00000489037 ANKHD1Q8IWZ3 2542 aaKnown RBP12.82□□□□□ -0.36
BRCA1-218ENST00000489037 A0A0G2JPF8 293 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 A0A0J9YW62 118 aa12.82□□□□□ -0.36
BRCA1-218ENST00000489037 CENPVL1A0A0U1RR11 272 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms