RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 THBDP07204 575 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 PABPC4LP0CB38 370 aaKnown RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 UQCRC2P22695 453 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 AGTR1P30556 359 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 S100A3P33764 101 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 WDR4P57081 412 aaKnown RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 UFM1P61960 85 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 CBFBQ13951 182 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 CASP8Q14790 479 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 MAPK14Q16539 360 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 ZNF239Q16600 458 aaKnown RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 FAM174BQ3ZCQ3 159 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 ATAD3BQ5T9A4 648 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 TNFAIP8L2Q6P589 184 aaPredicted RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 CROCCP2Q86T23 111 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 TUSC5Q8IXB3 177 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 WFDC11Q8NEX6 87 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 MIPOL1Q8TD10 442 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 MGARPQ8TDB4 240 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 CPNE4Q96A23 557 aaPredicted RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 TESCQ96BS2 214 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 MARK4Q96L34 752 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 MRGPRX4Q96LA9 322 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 TEX37Q96LM6 180 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 LAT2Q9GZY6 243 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 QRSL1Q9H0R6 528 aaKnown RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 WDR55Q9H6Y2 383 aaPredicted RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 UBTD1Q9HAC8 227 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 EXD2Q9NVH0 621 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 BEX4Q9NWD9 120 aaPredicted RBP10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 MTORP42345 2549 aa10.65□□□□□ -0.7
CCHCR1-215ENST00000488920 SETD2Q9BYW2 2564 aaPredicted RBP10.65□□□□□ -0.71
CCHCR1-215ENST00000488920 IGHV3-15A0A0B4J1V0 119 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 A0A1W2PNR3 127 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 TMEM120BA0PK00 339 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 E9PBE3 544 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 SDHDO14521 159 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 PRKD3O94806 890 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 CSTAP01040 98 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ALDOCP09972 364 aaKnown RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 UBTFL6P0CB48 400 aaPredicted RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 NID1P14543 1247 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ENPP1P22413 925 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 SLC7A1P30825 629 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 HOXC12P31275 282 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 CHI3L1P36222 383 aaPredicted RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 CLNS1AP54105 237 aaKnown RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 NKX6-1P78426 367 aaPredicted RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 SKP2Q13309 424 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 RNPS1Q15287 305 aaKnown RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ACKR1Q16570 336 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 TIGD2Q4W5G0 525 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 SLC25A53Q5H9E4 307 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 TMEM201Q5SNT2 666 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 SAXO2Q658L1 398 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 HEPHL1Q6MZM0 1159 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 BEND4Q6ZU67 534 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 EIF3MQ7L2H7 374 aaKnown RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 FCRLAQ7L513 359 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 NUFIP2Q7Z417 695 aaKnown RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 HMGN2P46Q86SG4 172 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 STK32CQ86UX6 486 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 CXorf67Q86X51 503 aaPredicted RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 KIRREL3Q8IZU9 778 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 RNF128Q8TEB7 428 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ZFP90Q8TF47 636 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ROPN1LQ96C74 230 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ZG16BQ96DA0 208 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 SLC35A5Q9BS91 424 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 ZNF350Q9GZX5 532 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 GSX1Q9H4S2 264 aaPredicted RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 COQ10BQ9H8M1 238 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 MARCOQ9UEW3 520 aaPredicted RBP10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 WDR45Q9Y484 360 aa10.64□□□□□ -0.71
CCHCR1-215ENST00000488920 GOLGA8QA0A0J9YX86 632 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 GOLGA8OA6NCC3 632 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 CCDC154A6NI56 674 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 GOLGA8NF8WBI6 632 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 KLF4O43474 513 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 BCAS1O75363 584 aaPredicted RBP10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 AGR2O95994 175 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 YES1P07947 543 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 KITP10721 976 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 PPP3CBP16298 524 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 LOXP28300 417 aaPredicted RBP10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 EPHA3P29320 983 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 IL12AP29459 219 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 SESN3P58005 492 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 FUT5Q11128 374 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 MERTKQ12866 999 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 SELENBP1Q13228 472 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 TSC22D1Q15714 1073 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 TYW3Q6IPR3 259 aaKnown RBP10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 OGFOD2Q6N063 350 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 SPATA19Q7Z5L4 167 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 LRRC34Q8IZ02 419 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 ARL8AQ96BM9 186 aa10.63□□□□□ -0.71
CCHCR1-215ENST00000488920 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms