RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 OR52K1Q8NGK4 314 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 CLSTN2Q9H4D0 955 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 ZSCAN16Q9H4T2 348 aaPredicted RBP2.78□□□□□ -1.96
SSR1-209ENST00000488834 LRRC40Q9H9A6 602 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 VAT1LQ9HCJ6 419 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 QPCTLQ9NXS2 382 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 TMEM9Q9P0T7 183 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 MBD2Q9UBB5 411 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 MGAT4BQ9UQ53 548 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 CHMP2BQ9UQN3 213 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 CA5BQ9Y2D0 317 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 POLR1AO95602 1720 aaPredicted RBP2.78□□□□□ -1.96
SSR1-209ENST00000488834 WDR97A6NE52 1622 aa2.78□□□□□ -1.96
SSR1-209ENST00000488834 EIF4G1Q04637 1599 aaKnown RBP2.78□□□□□ -1.96
SSR1-209ENST00000488834 CUX2O14529 1486 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 KTN1Q86UP2 1357 aaKnown RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 CTTNBP2Q8WZ74 1663 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 NCF1BA6NI72 391 aaPredicted RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 WASHC1A8K0Z3 465 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 NCF1CA8MVU1 366 aaPredicted RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 WASH3PC4AMC7 463 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 E9PBE3 544 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 E9PLD3 99 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 H0YIV9 168 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 H0YL77 283 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 PDXKO00764 312 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 OR7A17O14581 309 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 ALOX15BO15296 676 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 LANCL1O43813 399 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 PAHP00439 452 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CA3P07451 260 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 GALP22466 123 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CALB2P22676 271 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CCNHP51946 323 aaPredicted RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 NAPAP54920 295 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 WNT4P56705 351 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 TNFRSF17Q02223 184 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 PLOD1Q02809 727 aaPredicted RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 ZP4Q12836 540 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 PDZK1IP1Q13113 114 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 EXOSC2Q13868 293 aaKnown RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 NADK2Q4G0N4 442 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 SBK1Q52WX2 424 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 SPATA46Q5T0L3 261 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 LEG1Q6P5S2 330 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 BTNL3Q6UXE8 466 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 ZNF562Q6V9R5 426 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 WASH2PQ6VEQ5 465 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 SCARA5Q6ZMJ2 495 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 LRRC70Q7Z2Q7 622 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 KIAA1328Q86T90 577 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 SLC22A9Q8IVM8 553 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CCDC65Q8IXS2 484 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CCDC36Q8IYA8 594 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CEND1Q8N111 149 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 BBS5Q8N3I7 341 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CERS5Q8N5B7 392 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 FBXO32Q969P5 355 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 IMMP1LQ96LU5 166 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 SECISBP2Q96T21 854 aaKnown RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 ZBTB18Q99592 522 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 CNPY3Q9BT09 278 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 TBC1D10AQ9BXI6 508 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 FAM107BQ9H098 131 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 EHD1Q9H4M9 534 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 PTGES2Q9H7Z7 377 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 ACTR8Q9H981 624 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 ISG20L2Q9H9L3 353 aaKnown RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 MEPEQ9NQ76 525 aaPredicted RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 RPRD1BQ9NQG5 326 aaKnown RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 FARSBQ9NSD9 589 aaKnown RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 RPS6KB2Q9UBS0 482 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 PSME2Q9UL46 239 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 TRAF3IP3Q9Y228 551 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 EXOSC1Q9Y3B2 195 aaKnown RBP2.77□□□□□ -1.97
SSR1-209ENST00000488834 AK9Q5TCS8 1911 aa2.77□□□□□ -1.97
SSR1-209ENST00000488834 PTPRGP23470 1445 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 CEP162Q5TB80 1403 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 MYOM3Q5VTT5 1437 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 BRD4O60885 1362 aaPredicted RBP2.76□□□□□ -1.97
SSR1-209ENST00000488834 ROCK2O75116 1388 aaKnown RBP2.76□□□□□ -1.97
SSR1-209ENST00000488834 C15orf38-AP3S2A0A0A6YYH1 394 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 GOLGA6L7A0A1B0GV03 622 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 FBLL1A6NHQ2 334 aaKnown RBP2.76□□□□□ -1.97
SSR1-209ENST00000488834 DHRS7CA6NNS2 312 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 KIF2AO00139 706 aaPredicted RBP2.76□□□□□ -1.97
SSR1-209ENST00000488834 IMPA2O14732 288 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 VPS26AO75436 327 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 ZNF254O75437 659 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 SURF6O75683 361 aaKnown RBP2.76□□□□□ -1.97
SSR1-209ENST00000488834 TOXO94900 526 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 SLITRK3O94933 977 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 FGF4P08620 206 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 CALCBP10092 127 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 UQCRBP14927 111 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 H2AFXP16104 143 aaPredicted RBP2.76□□□□□ -1.97
SSR1-209ENST00000488834 TNNI3P19429 210 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 PAICSP22234 425 aaKnown RBP2.76□□□□□ -1.97
SSR1-209ENST00000488834 AXLP30530 894 aa2.76□□□□□ -1.97
SSR1-209ENST00000488834 RPL4P36578 427 aaKnown RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms