RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SRYQ05066 204 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 SF3B4Q15427 424 aaKnown RBP eCLIP14.25□□□□□ -0.13
C9orf3-219ENST00000488186 PLPPR5Q32ZL2 321 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 RNF220Q5VTB9 566 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 VASNQ6EMK4 673 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 DHRS4L2Q6PKH6 230 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 CHMP1BQ7LBR1 199 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 CD163Q86VB7 1156 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 DEFB107AQ8IZN7 70 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 CLIP4Q8N3C7 705 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 SMYD1Q8NB12 490 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 FAM71CQ8NEG0 241 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 SMPDL3BQ92485 455 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 FIG4Q92562 907 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 ARSGQ96EG1 525 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 TIMP4Q99727 224 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 PINK1Q9BXM7 581 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 UGT2B28Q9BY64 529 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 DNAJB12Q9NXW2 375 aaKnown RBP14.25□□□□□ -0.13
C9orf3-219ENST00000488186 TMEM181Q9P2C4 612 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 USP22Q9UPT9 525 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 ZNF835Q9Y2P0 537 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 ZNF407Q9C0G0 2248 aa14.25□□□□□ -0.13
C9orf3-219ENST00000488186 A0A1B0GUH1 482 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 OR2M5A3KFT3 312 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 FIGNL2A6NMB9 653 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 SHISA8B8ZZ34 492 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 UBOX5O94941 541 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 MFN2O95140 757 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 OPN1SWP03999 348 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 GKN3PP0CG01 181 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 ZNF17P17021 662 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 IDH2P48735 452 aaKnown RBP14.24□□□□□ -0.13
C9orf3-219ENST00000488186 STARP49675 285 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 GSK3BP49841 420 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 GFRA1P56159 465 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 PCBP3P57721 371 aaKnown RBP14.24□□□□□ -0.13
C9orf3-219ENST00000488186 NCALDP61601 193 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 TOMM34Q15785 309 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-219ENST00000488186 C3AR1Q16581 482 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 LRRC23Q53EV4 343 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-219ENST00000488186 NHSL2Q5HYW2 709 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 SAMD4BQ5PRF9 694 aaKnown RBP14.24□□□□□ -0.13
C9orf3-219ENST00000488186 C1QL3Q5VWW1 255 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 CCDC80Q76M96 950 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 FGD2Q7Z6J4 655 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 GRAMD2AQ8IUY3 354 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 GTPBP8Q8N3Z3 284 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-219ENST00000488186 MEIOBQ8N635 442 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 FBXO27Q8NI29 283 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 ST8SIA1Q92185 356 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 MRGPRX4Q96LA9 322 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 RNF145Q96MT1 663 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 TP63Q9H3D4 680 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-219ENST00000488186 SERINC1Q9NRX5 453 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 PNPLA3Q9NST1 481 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 ABCD2Q9UBJ2 740 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 RPS6KB2Q9UBS0 482 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 ZNF337Q9Y3M9 751 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 AP4B1Q9Y6B7 739 aa14.24□□□□□ -0.13
C9orf3-219ENST00000488186 NCKAP5O14513 1909 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 H0Y3Z8 333 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 CXCR6O00574 342 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 CCL21O00585 134 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 BCAS1O75363 584 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-219ENST00000488186 STSP08842 583 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 GABRA1P14867 456 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 ADH6P28332 368 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 KDELR2P33947 212 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 SESN3P58005 492 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 CRYZQ08257 329 aaKnown RBP14.23□□□□□ -0.13
C9orf3-219ENST00000488186 DMTNQ08495 405 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 MERTKQ12866 999 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 EPS8Q12929 822 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 FOXF1Q12946 379 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 POMZP3Q6PJE2 187 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 Q6ZPB1 254 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-219ENST00000488186 UBQLNLQ8IYU4 475 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 CADM2Q8N3J6 435 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 RNF148Q8N7C7 305 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 RBM15BQ8NDT2 890 aaKnown RBP14.23□□□□□ -0.13
C9orf3-219ENST00000488186 ATP6V1C2Q8NEY4 427 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 PROX1Q92786 737 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 FAM162AQ96A26 154 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 EVA1AQ9H8M9 152 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 ACER3Q9NUN7 267 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 TINAGQ9UJW2 476 aa14.23□□□□□ -0.13
C9orf3-219ENST00000488186 DIDO1Q9BTC0 2240 aaKnown RBP14.23□□□□□ -0.13
C9orf3-219ENST00000488186 C7orf72A4D263 438 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 GJE1A6NN92 205 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 AHRRA9YTQ3 701 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 AP3D1O14617 1153 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 LRRTM2O43300 516 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 SEC14L5O43304 696 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 TPST1O60507 370 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 WDR1O75083 606 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 HOXD4P09016 255 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-219ENST00000488186 FREM3P0C091 2139 aa14.22□□□□□ -0.13
C9orf3-219ENST00000488186 T-ENOLP0DO92 83 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms