RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TIGD4Q8IY51 512 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 EDEM2Q9BV94 578 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 PPA2Q9H2U2 334 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 TEX10Q9NXF1 929 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-221ENST00000488111 DNAJC27Q9NZQ0 273 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 C5AR2Q9P296 337 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 FBXW2Q9UKT8 454 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 RPL36Q9Y3U8 105 aaKnown RBP12.72□□□□□ -0.37
COPS7B-221ENST00000488111 SCAMP2O15127 329 aaKnown RBP12.72□□□□□ -0.37
COPS7B-221ENST00000488111 GASTP01350 101 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF883P0CG24 379 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 RRASP10301 218 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 GABRA4P48169 554 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 PRSS53Q2L4Q9 553 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF770Q6IQ21 691 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-221ENST00000488111 SRFBP1Q8NEF9 429 aaKnown RBP12.72□□□□□ -0.37
COPS7B-221ENST00000488111 GAL3ST3Q96A11 431 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 SLC7A5P2Q9GIP4 190 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 SPRTNQ9H040 489 aaPredicted RBP12.72□□□□□ -0.37
COPS7B-221ENST00000488111 BTNL2Q9UIR0 455 aa12.72□□□□□ -0.37
COPS7B-221ENST00000488111 GLOD5A6NK44 160 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 PRKACAP17612 351 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 EVX1P49640 407 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 HSD11B2P80365 405 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 GAB1Q13480 694 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 SLC9A5Q14940 896 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF385BQ569K4 471 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 CCDC157Q569K6 752 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 GARNL3Q5VVW2 1013 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 BICRALQ6AI39 1079 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 ZNF655Q8N720 491 aaPredicted RBP12.71□□□□□ -0.37
COPS7B-221ENST00000488111 OR52P1PQ8NH57 321 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 MTERF3Q96E29 417 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 TSSK6Q9BXA6 273 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 REEP4Q9H6H4 257 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 NMNAT1Q9HAN9 279 aaPredicted RBP12.71□□□□□ -0.37
COPS7B-221ENST00000488111 PARD6AQ9NPB6 346 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 MYNNQ9NPC7 610 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 NCDNQ9UBB6 729 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 COMMD3Q9UBI1 195 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 ADAM29Q9UKF5 820 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 ATG4BQ9Y4P1 393 aa12.71□□□□□ -0.37
COPS7B-221ENST00000488111 A0A0A6YYJ9 748 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 NDUFA2O43678 99 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 HPGDSO60760 199 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 SERPINI2O75830 405 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 FURINP09958 794 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 SMIM10L1P0DMW3 83 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 CD59P13987 128 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 FOLR1P15328 257 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 DUSP3P51452 185 aaPredicted RBP12.71□□□□□ -0.38
COPS7B-221ENST00000488111 TGM3Q08188 693 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 RIPPLY1Q0D2K3 151 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 KLHL12Q53G59 568 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 CPTPQ5TA50 214 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 C12orf73Q69YU5 71 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 QSOX2Q6ZRP7 698 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 SYT14Q8NB59 555 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 SMIM10Q96HG1 83 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 MALT1Q9UDY8 824 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 PLCL2Q9UPR0 1127 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 SF3B6Q9Y3B4 125 aaKnown RBP12.71□□□□□ -0.38
COPS7B-221ENST00000488111 FKBP7Q9Y680 259 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 SCN3AQ9NY46 2000 aa12.71□□□□□ -0.38
COPS7B-221ENST00000488111 RALGAPA1Q6GYQ0 2036 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 C7orf66A4D0T2 115 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 URADA6NGE7 173 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 TOR1AO14656 332 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 TSPAN4O14817 238 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 FLRT2O43155 660 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 GDF9O60383 454 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 SRPX2O60687 465 aaPredicted RBP12.7□□□□□ -0.38
COPS7B-221ENST00000488111 GADD45GO95257 159 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 IFNA7P01567 189 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 POU1F1P28069 291 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 IL18Q14116 193 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 PRAMEF17Q5VTA0 474 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 C18orf63Q68DL7 685 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 ARSKQ6UWY0 536 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 ABHD13Q7L211 337 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 C16orf62Q7Z3J2 963 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 LRRC17Q8N6Y2 441 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 OR11H4Q8NGC9 324 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 OR5T3Q8NGG3 340 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 OR10Z1Q8NGY1 313 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 GEMIN6Q8WXD5 167 aaKnown RBP12.7□□□□□ -0.38
COPS7B-221ENST00000488111 TMEM203Q969S6 136 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 CIDECQ96AQ7 238 aaPredicted RBP12.7□□□□□ -0.38
COPS7B-221ENST00000488111 DUSP26Q9BV47 211 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 PRR14Q9BWN1 585 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 NLNQ9BYT8 704 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 MED28Q9H204 178 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 MIEF1Q9NQG6 463 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 SLCO1C1Q9NYB5 712 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 REV1Q9UBZ9 1251 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 DIMT1Q9UNQ2 313 aaKnown RBP12.7□□□□□ -0.38
COPS7B-221ENST00000488111 ASB4Q9Y574 426 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 IGHV5-10-1A0A0J9YXX1 117 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 A0A1W2PR48 441 aa12.7□□□□□ -0.38
COPS7B-221ENST00000488111 SMIM30A4D0T7 59 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms