RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 PP2D1A8MPX8 630 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 SRRM5B3KS81 715 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 E7ESA3 106 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 CCDC130P13994 396 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 GATA1P15976 413 aaPredicted RBP4.42□□□□□ -1.7
CUL3-211ENST00000487558 CYP2B6P20813 491 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 MMP11P24347 488 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 PBLDP30039 288 aaPredicted RBP4.42□□□□□ -1.7
CUL3-211ENST00000487558 YWHABP31946 246 aaKnown RBP4.42□□□□□ -1.7
CUL3-211ENST00000487558 CD80P33681 288 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 SSR1P43307 286 aaKnown RBP4.42□□□□□ -1.7
CUL3-211ENST00000487558 RPL29P47914 159 aaKnown RBP4.42□□□□□ -1.7
CUL3-211ENST00000487558 SULT1E1P49888 294 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 DPYSL2Q16555 572 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 TP53I3Q53FA7 332 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 RNLSQ5VYX0 342 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 OR5M10Q6IEU7 315 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 UFSP1Q6NVU6 142 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 OR5L2Q8NGL0 311 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 OR5D13Q8NGL4 314 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 TCTEX1D2Q8WW35 142 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 EFHD2Q96C19 240 aaPredicted RBP4.42□□□□□ -1.7
CUL3-211ENST00000487558 NIPSNAP3BQ9BS92 247 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 SPATA16Q9BXB7 569 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 GLIPR2Q9H4G4 154 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 ZNF385DQ9H6B1 395 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 NUDT15Q9NV35 164 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 HYPKQ9NX55 129 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 SIGLEC8Q9NYZ4 499 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 SPRR3Q9UBC9 169 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 CSAG2Q9Y5P2 127 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 USP16Q9Y5T5 823 aa4.42□□□□□ -1.7
CUL3-211ENST00000487558 DHRS7CA6NNS2 312 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 H0Y8G0 127 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 ZNF354AO60765 605 aaPredicted RBP4.41□□□□□ -1.7
CUL3-211ENST00000487558 ADORA2BP29275 332 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 NMT1P30419 496 aaKnown RBP4.41□□□□□ -1.7
CUL3-211ENST00000487558 CCT3P49368 545 aaKnown RBP4.41□□□□□ -1.7
CUL3-211ENST00000487558 LIM2P55344 173 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 ELAVL3Q14576 367 aaKnown RBP4.41□□□□□ -1.7
CUL3-211ENST00000487558 Q1RN00 199 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 C15orf32Q32M92 178 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 SLC25A52Q3SY17 297 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 BOLA3Q53S33 107 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 LIPNQ5VXI9 398 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 KRTAP5-4Q6L8H1 288 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 RHOXF1Q8NHV9 184 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 ARNTL2Q8WYA1 636 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 MRPS31Q92665 395 aaKnown RBP4.41□□□□□ -1.7
CUL3-211ENST00000487558 PSMG2Q969U7 264 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 CELF6Q96J87 481 aaKnown RBP4.41□□□□□ -1.7
CUL3-211ENST00000487558 MS4A14Q96JA4 679 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 RANBP9Q96S59 729 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 CYP2S1Q96SQ9 504 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 SLC35A5Q9BS91 424 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 GON7Q9BXV9 100 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 MAGT1Q9H0U3 335 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 MIEF1Q9NQG6 463 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 RIMS3Q9UJD0 308 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 MEMO1Q9Y316 297 aa4.41□□□□□ -1.7
CUL3-211ENST00000487558 AK6Q9Y3D8 172 aaKnown RBP4.41□□□□□ -1.7
CUL3-211ENST00000487558 LOC100131303A0A0U1RQF7 123 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 CCDC169A6NNP5 214 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 SULT2B1O00204 365 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 POLR2DO15514 142 aaKnown RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 GPX5O75715 221 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 POU2F1P14859 743 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 EPHX2P34913 555 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 RPL13AP40429 203 aaKnown RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 CASP4P49662 377 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 RPL23AP62750 156 aaKnown RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 CXCL6P80162 114 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 C1orf61Q13536 156 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 LPAL2Q16609 132 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 SFT2D3Q587I9 215 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 PAN3Q58A45 887 aaKnown RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 CCDC183Q5T5S1 534 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 TPGS2Q68CL5 300 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 ATL3Q6DD88 541 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 OR4F3Q6IEY1 312 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 FAM199XQ6PEV8 388 aaPredicted RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 VITQ6UXI7 678 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 NBPF5PQ86XG9 351 aaPredicted RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 MARCH9Q86YJ5 346 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 ATP6V0D2Q8N8Y2 350 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 TUBGCP3Q96CW5 907 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 PARD6BQ9BYG5 372 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 RHBGQ9H310 441 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 SGK2Q9HBY8 427 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 POLDIP2Q9Y2S7 368 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 TIMM10BQ9Y5J6 103 aa4.4□□□□□ -1.71
CUL3-211ENST00000487558 COL5A2P05997 1499 aaPredicted RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 RPAP1Q9BWH6 1393 aaPredicted RBP4.4□□□□□ -1.71
CUL3-211ENST00000487558 IGHV3-35A0A0C4DH35 117 aa4.39□□□□□ -1.71
CUL3-211ENST00000487558 FRG2CA6NGY1 282 aa4.39□□□□□ -1.71
CUL3-211ENST00000487558 F5H6K3 240 aa4.39□□□□□ -1.71
CUL3-211ENST00000487558 K7ENP7 123 aa4.39□□□□□ -1.71
CUL3-211ENST00000487558 LATO43561 262 aa4.39□□□□□ -1.71
CUL3-211ENST00000487558 FCMRO60667 390 aa4.39□□□□□ -1.71
CUL3-211ENST00000487558 PGK1P00558 417 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms