RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 SSTR4P31391 388 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 SKP1P63208 163 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 EXOSC7Q15024 291 aaKnown RBP24.15■■□□□ 1.46
HLA-C-208ENST00000487245 TRAM1Q15629 374 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 ZNF613Q6PF04 617 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 TRILQ7L0X0 811 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 ZDHHC1Q8WTX9 485 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 RNF31Q96EP0 1072 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 ALG8Q9BVK2 526 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 TMEM27Q9HBJ8 222 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 CMC2Q9NRP2 79 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 KCNE5Q9UJ90 142 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 CYP8B1Q9UNU6 501 aa24.15■■□□□ 1.46
HLA-C-208ENST00000487245 CD8B2A6NJW9 211 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 OR10H2O60403 315 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 CELA2BP08218 269 aaPredicted RBP24.14■■□□□ 1.45
HLA-C-208ENST00000487245 PRKAR1AP10644 381 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 CD8BP10966 210 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 IFI30P13284 250 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 BMP7P18075 431 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 CTBP2P56545 445 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 CDK10Q15131 360 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 ZNF542PQ5EBM4 170 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 PRPF38BQ5VTL8 546 aaKnown RBP24.14■■□□□ 1.45
HLA-C-208ENST00000487245 DOK4Q8TEW6 326 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 KISS1RQ969F8 398 aaPredicted RBP24.14■■□□□ 1.45
HLA-C-208ENST00000487245 OTULINQ96BN8 352 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 AHCYL2Q96HN2 611 aaKnown RBP24.14■■□□□ 1.45
HLA-C-208ENST00000487245 IL20RAQ9UHF4 553 aa24.14■■□□□ 1.45
HLA-C-208ENST00000487245 BLACEA4D250 179 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 FAM86C2PA6NEL3 165 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 PEX12O00623 359 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 GKN3PP0CG01 181 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 DRD5P21918 477 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 CAPZA2P47755 286 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 GALEQ14376 348 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 SF3A2Q15428 464 aaKnown RBP24.13■■□□□ 1.45
HLA-C-208ENST00000487245 FIGNL1Q6PIW4 674 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 PLET1Q6UQ28 207 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 KCTD12Q96CX2 325 aaKnown RBP24.13■■□□□ 1.45
HLA-C-208ENST00000487245 KLHDC7BQ96G42 594 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 ISG20L2Q9H9L3 353 aaKnown RBP24.13■■□□□ 1.45
HLA-C-208ENST00000487245 FBXO34Q9NWN3 711 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 SLC22A31A6NKX4 558 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 FAM183AA6NL82 134 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 RDH16O75452 317 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 NCR1O76036 304 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 CBX7O95931 251 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 ST6GAL1P15907 406 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 TCEA1P23193 301 aaKnown RBP24.13■■□□□ 1.45
HLA-C-208ENST00000487245 COL9A2Q14055 689 aaPredicted RBP24.13■■□□□ 1.45
HLA-C-208ENST00000487245 P2RY14Q15391 338 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 ZNHIT3Q15649 155 aaPredicted RBP24.13■■□□□ 1.45
HLA-C-208ENST00000487245 ZSWIM7Q19AV6 140 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 SLC43A2Q8N370 569 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 AVL9Q8NBF6 648 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 LMF2Q9BU23 707 aaKnown RBP24.13■■□□□ 1.45
HLA-C-208ENST00000487245 B3GAT2Q9NPZ5 323 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 TRIM36Q9NQ86 728 aa24.13■■□□□ 1.45
HLA-C-208ENST00000487245 GXYLT2A0PJZ3 443 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 SHISA7A6NL88 538 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 IL18Q14116 193 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 AMZ1Q400G9 498 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 GRAMD2AQ8IUY3 354 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 LIX1LQ8IVB5 337 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 MCATQ8IVS2 390 aaKnown RBP24.12■■□□□ 1.45
HLA-C-208ENST00000487245 SFTPA2Q8IWL1 248 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 ARHGEF39Q8N4T4 335 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 TMEM99Q8N816 258 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 C19orf47Q8N9M1 422 aaKnown RBP24.12■■□□□ 1.45
HLA-C-208ENST00000487245 OR52R1Q8NGF1 315 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 PFN4Q8NHR9 129 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 STARD5Q9NSY2 213 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 WSB2Q9NYS7 404 aaPredicted RBP24.12■■□□□ 1.45
HLA-C-208ENST00000487245 NUFIP1Q9UHK0 495 aaKnown RBP24.12■■□□□ 1.45
HLA-C-208ENST00000487245 KLHL21Q9UJP4 597 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 BAIAP2Q9UQB8 552 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 MED31Q9Y3C7 131 aa24.12■■□□□ 1.45
HLA-C-208ENST00000487245 C2orf92A0A1B0GVN3 265 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 A0A1W2PPC4 97 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 SRPX2O60687 465 aaPredicted RBP24.11■■□□□ 1.45
HLA-C-208ENST00000487245 CSF2P04141 144 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 YES1P07947 543 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 TYRP1P17643 537 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 F8A1P23610 371 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 MRPS15P82914 257 aaKnown RBP24.11■■□□□ 1.45
HLA-C-208ENST00000487245 COL19A1Q14993 1142 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 HBMQ6B0K9 141 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 PARGQ86W56 976 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 TCTE3Q8IZS6 198 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 ASCC1Q8N9N2 400 aaKnown RBP24.11■■□□□ 1.45
HLA-C-208ENST00000487245 ADAMTS18Q8TE60 1221 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 GPR174Q9BXC1 333 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 FAM60AQ9NP50 221 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 C20orf141Q9NUB4 165 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 SIGLEC7Q9Y286 467 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 MRPS33Q9Y291 106 aaKnown RBP24.11■■□□□ 1.45
HLA-C-208ENST00000487245 SIRT4Q9Y6E7 314 aaPredicted RBP24.11■■□□□ 1.45
HLA-C-208ENST00000487245 NPIPA5A0A0B4J1W7 369 aa24.11■■□□□ 1.45
HLA-C-208ENST00000487245 DAPL1A0PJW8 107 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms