RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 PAGE3Q5JUK9 113 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 PDSS1Q5T2R2 415 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 GCNT6Q5T4J0 391 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 SP5Q6BEB4 398 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 C3orf33Q6P1S2 294 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 LRRC74BQ6ZQY2 392 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 SEM1Q6ZVN7 128 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 GTPBP8Q8N3Z3 284 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 CNEP1R1Q8N9A8 125 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 C9orf106Q8NAJ2 232 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 NAXEQ8NCW5 288 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 OR5W2Q8NH69 310 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 LILRB4Q8NHJ6 448 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 MBD3L2Q8NHZ7 208 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 FBXO27Q8NI29 283 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 TMEM234Q8WY98 164 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 INTS12Q96CB8 462 aaKnown RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 TMEM19Q96HH6 336 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 NPAS1Q99742 590 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 USB1Q9BQ65 265 aaKnown RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 KLHDC3Q9BQ90 382 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 THUMPD3Q9BV44 507 aaKnown RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 NSRP1Q9H0G5 558 aaKnown RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 SLC38A1Q9H2H9 487 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 RUBCNLQ9H714 662 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 CALHM2Q9HA72 323 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 MRGBPQ9NV56 204 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 KCNE5Q9UJ90 142 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 ICAM5Q9UMF0 924 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 GPC6Q9Y625 555 aaPredicted RBP9.21□□□□□ -0.94
NEK4-204ENST00000487068 C2CD3Q4AC94 2353 aa9.21□□□□□ -0.94
NEK4-204ENST00000487068 PRAMEF27A3QJZ7 478 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 CLDN24A6NM45 220 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 GJE1A6NN92 205 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 C19orf84I3L1E1 186 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 SMNDC1O75940 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
NEK4-204ENST00000487068 TOXO94900 526 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 SYNGR4O95473 234 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 LINGO3P0C6S8 592 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 PRKCAP17252 672 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 UQCRC1P31930 480 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 ASCL1P50553 236 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 MVDP53602 400 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 CLDN15P56746 228 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 SIRPAP78324 504 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 KCNJ10P78508 379 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 MERTKQ12866 999 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 SELENBP1Q13228 472 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 SKP2Q13309 424 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 LARS2Q15031 903 aaKnown RBP9.2□□□□□ -0.94
NEK4-204ENST00000487068 MAPRE2Q15555 327 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 TOMM34Q15785 309 aaPredicted RBP9.2□□□□□ -0.94
NEK4-204ENST00000487068 MAPK14Q16539 360 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 BCL2A1Q16548 175 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 CYP51A1Q16850 503 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 LIN52Q52LA3 116 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 LRIF1Q5T3J3 769 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 METTL21CQ5VZV1 264 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 HBMQ6B0K9 141 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 OR2A2Q6IF42 318 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 CGB2Q6NT52 195 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 MEX3BQ6ZN04 569 aaKnown RBP9.2□□□□□ -0.94
NEK4-204ENST00000487068 MCEMP1Q8IX19 187 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 LILRA2Q8N149 483 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 NFKBIDQ8NI38 313 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 FNDC9Q8TBE3 224 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 OIT3Q8WWZ8 545 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 WNT2BQ93097 391 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 MAL2Q969L2 176 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 REXO5Q96IC2 774 aaKnown RBP9.2□□□□□ -0.94
NEK4-204ENST00000487068 ZNF845Q96IR2 970 aaPredicted RBP9.2□□□□□ -0.94
NEK4-204ENST00000487068 KLHL15Q96M94 604 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 ZFP3Q96NJ6 502 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 LAT2Q9GZY6 243 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 SAP130Q9H0E3 1048 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 CCDC134Q9H6E4 229 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 ARMC7Q9H6L4 198 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 TMEM45AQ9NWC5 275 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 SLC25A37Q9NYZ2 338 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 VAPAQ9P0L0 249 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 KLHL14Q9P2G3 628 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 CLCF1Q9UBD9 225 aa9.2□□□□□ -0.94
NEK4-204ENST00000487068 MCTS1Q9ULC4 181 aaKnown RBP9.2□□□□□ -0.94
NEK4-204ENST00000487068 C7orf72A4D263 438 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 AGAP5A6NIR3 686 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 CXCL13O43927 109 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 TFPIP10646 304 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 NID1P14543 1247 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 IL11P20809 199 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 CTSSP25774 331 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 CEACAM8P31997 349 aaPredicted RBP9.19□□□□□ -0.94
NEK4-204ENST00000487068 OPRM1P35372 400 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 CPOXP36551 454 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 PGM1P36871 562 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 SLC6A8P48029 635 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 ZNF136P52737 540 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 SUCLG1P53597 346 aaKnown RBP9.19□□□□□ -0.94
NEK4-204ENST00000487068 MTPNP58546 118 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 RAC1P63000 192 aa9.19□□□□□ -0.94
NEK4-204ENST00000487068 MYBPHQ13203 477 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms