RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 PP2D1A8MPX8 630 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 E7ESA3 106 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 WWP2O00308 870 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 ARPC3O15145 178 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 ZNF254O75437 659 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 ALOX5P09917 674 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 CCDC166P0CW27 439 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 DBTP11182 482 aaKnown RBP3.41□□□□□ -1.86
SMC4-218ENST00000486711 VDAC1P21796 283 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 FASP25445 335 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 NMT1P30419 496 aaKnown RBP3.41□□□□□ -1.86
SMC4-218ENST00000486711 GCKP35557 465 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 MEOX2P50222 304 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 OC90Q02509 493 aaPredicted RBP3.41□□□□□ -1.86
SMC4-218ENST00000486711 TIGITQ495A1 244 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 UTF1Q5T230 341 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 KDELC1Q6UW63 502 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 Q6ZR54 194 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 DNM1P46Q6ZS02 220 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 CCDC80Q76M96 950 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 MOB1BQ7L9L4 216 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 GPR137CQ8N3F9 429 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 FBXL16Q8N461 479 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 LINC00612Q8N6U2 182 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 OR5L2Q8NGL0 311 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 TCTEX1D2Q8WW35 142 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 SLC5A11Q8WWX8 675 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 ARNTL2Q8WYA1 636 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 EMG1Q92979 244 aaKnown RBP3.41□□□□□ -1.86
SMC4-218ENST00000486711 FAF2Q96CS3 445 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 ZNF414Q96IQ9 312 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 TGM7Q96PF1 710 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 C19orf24Q9BVV8 132 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 SPATA16Q9BXB7 569 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 DEFB126Q9BYW3 111 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 SLC17A5Q9NRA2 495 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 ZNF275Q9NSD4 429 aaPredicted RBP3.41□□□□□ -1.86
SMC4-218ENST00000486711 PIPOXQ9P0Z9 390 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 EXTL2Q9UBQ6 330 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 TBK1Q9UHD2 729 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 LCMT1Q9UIC8 334 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 PLLPQ9Y342 182 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 SLCO1B1Q9Y6L6 691 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 LOC100131303A0A0U1RQF7 123 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 PCP4L1A6NKN8 68 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 SULT2B1O00204 365 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 PHOX2AO14813 284 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 LATO43561 262 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 TBL1XO60907 577 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 ZP3P21754 424 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 HOXD10P28358 340 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 NTSP30990 170 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 CD80P33681 288 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 MAP2K1Q02750 393 aaPredicted RBP3.4□□□□□ -1.87
SMC4-218ENST00000486711 BCL2L1Q07817 233 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 NCBP1Q09161 790 aaKnown RBP3.4□□□□□ -1.87
SMC4-218ENST00000486711 IL24Q13007 206 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 CHIT1Q13231 466 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 CUL1Q13616 776 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 PTCH1Q13635 1447 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 EXOC3L2Q2M3D2 409 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 SBK1Q52WX2 424 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 BEND3Q5T5X7 828 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 WSCD1Q658N2 575 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 CLEC4FQ8N1N0 589 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 OR4D5Q8NGN0 318 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 OR13F1Q8NGS4 319 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 OR1F12Q8NHA8 337 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 MRAPQ8TCY5 172 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 MAIP1Q8WWC4 291 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 MRPS31Q92665 395 aaKnown RBP3.4□□□□□ -1.87
SMC4-218ENST00000486711 FGGYQ96C11 551 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 CELF6Q96J87 481 aaKnown RBP3.4□□□□□ -1.87
SMC4-218ENST00000486711 CYP2S1Q96SQ9 504 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 NAT10Q9H0A0 1025 aaKnown RBP3.4□□□□□ -1.87
SMC4-218ENST00000486711 VCX2Q9H322 139 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 LRRC40Q9H9A6 602 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 ISG20L2Q9H9L3 353 aaKnown RBP3.4□□□□□ -1.87
SMC4-218ENST00000486711 APMAPQ9HDC9 416 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 UFSP2Q9NUQ7 469 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 NUDT15Q9NV35 164 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 OR1A1Q9P1Q5 309 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 RIMS3Q9UJD0 308 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 VSIG4Q9Y279 399 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 USP16Q9Y5T5 823 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 ATAD2BQ9ULI0 1458 aa3.4□□□□□ -1.87
SMC4-218ENST00000486711 HCFC1P51610 2035 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 A0A1W2PQ72 361 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 K7ENP7 123 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 TNFSF11O14788 317 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 RIPK2O43353 540 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 HCN1O60741 890 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 PNMTP11086 282 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 CCDC130P13994 396 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 IMPDH1P20839 514 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 ANXA13P27216 316 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 LAP3P28838 519 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 STARP49675 285 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 SLC26A2P50443 739 aa3.39□□□□□ -1.87
SMC4-218ENST00000486711 HMGN5P82970 282 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms