RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 VSIG10L2P0DP72 767 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PTHLHP12272 177 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 FPR3P25089 353 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PPP2R1BP30154 601 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 MAPK8P45983 427 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 CTSCP53634 463 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 UBE2MP61081 183 aaKnown RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 FUT5Q11128 374 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 CCL14Q16627 93 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 UBE2NLQ5JXB2 153 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NIPAL3Q6P499 406 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NXPE4Q6UWF7 544 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 CXCL17Q6UXB2 119 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF620Q6ZNG0 422 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF600Q6ZNG1 722 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 RAB11FIP2Q7L804 512 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 DEFB132Q7Z7B7 95 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 LDLRAD3Q86YD5 345 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NRMQ8IXM6 262 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 CAMKVQ8NCB2 501 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 OR5J2Q8NH18 312 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 SLC35G5Q96KT7 338 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 PBX4Q9BYU1 374 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 KLHL9Q9P2J3 617 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 NOSIPQ9Y314 301 aaKnown RBP9.89□□□□□ -0.83
CCDC171-208ENST00000486641 ANAPC1Q9H1A4 1944 aa9.89□□□□□ -0.83
CCDC171-208ENST00000486641 TRAV20A0A0B4J274 112 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 GABARAPH6UMI1 98 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 CDC42EP2O14613 210 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 FLRT2O43155 660 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 KRT33AO76009 404 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 UCHL1P09936 223 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 TYRP1P17643 537 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ACHEP22303 614 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PTGER1P34995 402 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 GDI2P50395 445 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 DLX5P56178 289 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 NRG3P56975 720 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 GPNMBQ14956 572 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 DCAF12L2Q5VW00 463 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 DMKNQ6E0U4 476 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 HAGHLQ6PII5 290 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ADCK2Q7Z695 626 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 RTN4RL1Q86UN2 441 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 TMEM17Q86X19 198 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 GID4Q8IVV7 300 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 BOLLQ8N9W6 283 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 OR2AP1Q8NGE2 309 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 FCAMRQ8WWV6 532 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 DIO2Q92813 273 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 SLC25A28Q96A46 364 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ZG16BQ96DA0 208 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 DERL3Q96Q80 235 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 UTP23Q9BRU9 249 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 MFFQ9GZY8 342 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 UBQLN3Q9H347 655 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 SUV39H2Q9H5I1 410 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 MRPL17Q9NRX2 175 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 AKAP7Q9P0M2 348 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 B4GALT6Q9UBX8 382 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 CLEC4EQ9ULY5 219 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PPIL1Q9Y3C6 166 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 IRAK3Q9Y616 596 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 SLC5A10A0PJK1 596 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ANKRD20A5PA0PJZ0 165 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PYCARD-AS1I3L0S3 204 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 KLF4O43474 513 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 FMO6PO60774 539 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 STX11O75558 287 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 NDUFB6O95139 128 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 OR5F1O95221 314 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 C1orf105O95561 183 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 TBX6O95947 436 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 NDUFV2P19404 249 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PBLDP30039 288 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 DCTDP32321 178 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 FRKP42685 505 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 HAAOP46952 286 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 GCGRP47871 477 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 MECP2P51608 486 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PRKAG1P54619 331 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 AP3S2P59780 193 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ST3GAL3Q11203 375 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 HENMT1Q5T8I9 393 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PRAMEF13Q5VWM6 474 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 FAM199XQ6PEV8 388 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 CBLN2Q8IUK8 224 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PUSL1Q8N0Z8 303 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 NANPQ8TBE9 248 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 BRIX1Q8TDN6 353 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 KISS1RQ969F8 398 aaPredicted RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ORAI1Q96D31 301 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 CAMK1GQ96NX5 476 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 CMSS1Q9BQ75 279 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ADAT1Q9BUB4 502 aaKnown RBP9.88□□□□□ -0.83
CCDC171-208ENST00000486641 PINK1Q9BXM7 581 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 ENKD1Q9H0I2 346 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 BCL2L10Q9HD36 194 aa9.88□□□□□ -0.83
CCDC171-208ENST00000486641 RASL12Q9NYN1 266 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms