RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 B3GNT4Q9C0J1 378 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ASB6Q9NWX5 421 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 KLHL21Q9UJP4 597 aa10.31□□□□□ -0.76
HDAC6-228ENST00000486227 ARPC4-TTLL3A0A0A6YYG9 625 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 TEX13CA0A0J9YWL9 993 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF20P17024 532 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 ITGB8P26012 769 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 OR1D4P47884 311 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 GALEQ14376 348 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 PYCR3Q53H96 274 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 DCAF12Q5T6F0 453 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 FAM122CQ6P4D5 195 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 ARHGAP11AQ6P4F7 1023 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 OLIG3Q7RTU3 272 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 TMPRSS9Q7Z410 1059 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 FTMTQ8N4E7 242 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 SPEM1Q8N4L4 309 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 TMEM239Q8WW34 195 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF566Q969W8 418 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 EID2BQ96D98 161 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 HRASLS5Q96KN8 279 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 MBOAT4Q96T53 435 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 MAP3K3Q99759 626 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 SLC6A14Q9UN76 642 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 APOC3P02656 99 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 WNT4P56705 351 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 MAT1AQ00266 395 aaKnown RBP10.3□□□□□ -0.76
HDAC6-228ENST00000486227 SNTB2Q13425 540 aaKnown RBP10.3□□□□□ -0.76
HDAC6-228ENST00000486227 FCRLBQ6BAA4 426 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 SLC25A24Q6NUK1 477 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF304Q9HCX3 659 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 GREB1LQ9C091 1923 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-228ENST00000486227 MICAL3Q7RTP6 2002 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 C2CD4DB7Z1M9 353 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 SRPX2O60687 465 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-228ENST00000486227 PAHP00439 452 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 GAS6Q14393 721 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 C4orf46Q504U0 113 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 FAM109BQ6ICB4 259 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-228ENST00000486227 BAIAP2L2Q6UXY1 529 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 CEACAM19Q7Z692 300 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 OR2T35Q8NGX2 323 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 C6orf106Q9H6K1 298 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-228ENST00000486227 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 FOCADQ5VW36 1801 aa10.3□□□□□ -0.76
HDAC6-228ENST00000486227 CD8B2A6NJW9 211 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 VSTM2BA6NLU5 285 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 FLRT2O43155 660 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 PPP1R3DO95685 299 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 CD8BP10966 210 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 PRKCAP17252 672 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SSTR4P31391 388 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 GAB1Q13480 694 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 EFR3AQ14156 821 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TRAM1Q15629 374 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 PIP5KL1Q5T9C9 394 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TMEM215Q68D42 235 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ACOT11Q8WXI4 607 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 THAP4Q8WY91 577 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TBC1D20Q96BZ9 403 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 AMDHD1Q96NU7 426 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SPHK1Q9NYA1 384 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TAS2R10Q9NYW0 307 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 GLS2Q9UI32 602 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 CD160O95971 181 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 OPRD1P41143 372 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 CTXN1P60606 82 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ARG2P78540 354 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TNFRSF17Q02223 184 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 HYAL1Q12794 435 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TMEM196Q5HYL7 178 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SLC25A25Q6KCM7 469 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ZNF627Q7L945 461 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 MMP21Q8N119 569 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SLC37A2Q8TED4 501 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 PATE1Q8WXA2 126 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ADOQ96SZ5 270 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ORAI3Q9BRQ5 295 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 QPCTLQ9NXS2 382 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 EFCAB7A8K855 629 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ARHGAP33O14559 1287 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 PTHP01270 115 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 IGHEP01854 428 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 FCER2P06734 321 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 CCNOP22674 350 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SLC19A1P41440 591 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 CTF1Q16619 201 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 FAM198BQ6UWH4 519 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 AIFM2Q9BRQ8 373 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 NAA11Q9BSU3 229 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 KIR3DX1Q9H7L2 352 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 SLC25A37Q9NYZ2 338 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 TRBV4-1A0A0J9YWV2 114 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 OR2AT4A6NND4 320 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 RBM34P42696 430 aaKnown RBP10.29□□□□□ -0.76
HDAC6-228ENST00000486227 PPP2CBP62714 309 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 PPP2CAP67775 309 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ACTC1P68032 377 aa10.29□□□□□ -0.76
HDAC6-228ENST00000486227 ACTA1P68133 377 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms