RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 AP4S1Q9Y587 144 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 CEPT1Q9Y6K0 416 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 MCM3APO60318 1980 aa3.72□□□□□ -1.81
PRPF38B-205ENST00000485810 KAT6AQ92794 2004 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 MN1Q10571 1320 aaPredicted RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TRIP11Q15643 1979 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TRAV26-1A0A087WT03 109 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 A0A1B0GW15 77 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 MYBPHLA2RUH7 354 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CLEC18AA5D8T8 446 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 PRORSD1PA6NEY8 169 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 AGAP5A6NIR3 686 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 A8MT66 165 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 KCNU1A8MYU2 1149 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ANKRD66B4E2M5 251 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ADM5C9JUS6 153 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 USP17L23D6RBM5 183 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 PSMD12O00232 456 aaPredicted RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 FBP2O00757 339 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 UBDO15205 165 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 HSPA12AO43301 675 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 DHHO43323 396 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 SDC3O75056 442 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TRMUO75648 421 aaKnown RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ZMPSTE24O75844 475 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 WDR47O94967 919 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 EPOP01588 193 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 GPIP06744 558 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ERCC1P07992 297 aaPredicted RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 VPREB1P12018 145 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ENO3P13929 434 aaPredicted RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CD1EP15812 388 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 PPP3CBP16298 524 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ANXA7P20073 488 aaKnown RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CNR1P21554 472 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 DTYMKP23919 212 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 DNASE1P24855 282 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ACKR3P25106 362 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TEAD1P28347 426 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC6A6P31641 620 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 P2RY2P41231 377 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 NPBWR1P48145 328 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 PPP3CCP48454 512 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TGM4P49221 684 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ARRB1P49407 418 aaPredicted RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 NDST2P52849 883 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CTXN1P60606 82 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ACTBP60709 375 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 RAP2BP61225 183 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ATP6V0D1P61421 351 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ACTA2P62736 377 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ACTG1P63261 375 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ACTG2P63267 376 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ACTC1P68032 377 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ACTA1P68133 377 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 MRPS22P82650 360 aaKnown RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CDKL1Q00532 357 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ECT2LQ008S8 904 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 BNIP2Q12982 314 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 NME3Q13232 169 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 PEX6Q13608 980 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 SELPLGQ14242 412 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 SLC17A1Q14916 467 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 PSG3Q16557 428 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 LRRC36Q1X8D7 754 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 KIF19Q2TAC6 998 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF750Q32MQ0 723 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 C18orf21Q32NC0 220 aaPredicted RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ATP13A5Q4VNC0 1218 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CTSL3PQ5NE16 218 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 C6orf10Q5SRN2 563 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 FAM182AQ5T1J6 154 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF618Q5T7W0 954 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 METRNLQ641Q3 311 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TMEM198Q66K66 360 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 PMS2CLQ68D20 193 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 REP15Q6BDI9 236 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 LCN8Q6JVE9 175 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 RNASEKQ6P5S7 137 aaKnown RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CLEC18BQ6UXF7 455 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CYHR1Q6ZMK1 362 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 RBM44Q6ZP01 1051 aaKnown RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 LHFPL3Q86UP9 236 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 SATL1Q86VE3 508 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ZNF280BQ86YH2 543 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CROCCP3Q8IVE0 287 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 KLHDC8AQ8IYD2 350 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 RBFAQ8N0V3 343 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 UMODL1-AS1Q8N2C9 162 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 ATPAF2Q8N5M1 289 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TEX26Q8N6G2 289 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 NATD1Q8N6N6 113 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 C11orf44Q8N8P7 122 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 TERB1Q8NA31 727 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CLEC18CQ8NCF0 446 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 CPEB3Q8NE35 698 aaKnown RBP3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 OR51L1Q8NGJ5 315 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 OR5D13Q8NGL4 314 aa3.71□□□□□ -1.82
PRPF38B-205ENST00000485810 OR5M1Q8NGP8 315 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms