RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 QRSL1Q9H0R6 528 aaKnown RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 PIGMQ9H3S5 423 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 MED4Q9NPJ6 270 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 SLC6A13Q9NSD5 602 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 KCNE5Q9UJ90 142 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 FOXD3Q9UJU5 478 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF232Q9UNY5 417 aa11.26□□□□□ -0.61
PTCD1-205ENST00000485746 USP9YO00507 2555 aaPredicted RBP11.26□□□□□ -0.61
PTCD1-205ENST00000485746 DNAJC13O75165 2243 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 DOPEY1Q5JWR5 2465 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 A0A0J9YW62 118 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 CENPVL1A0A0U1RR11 272 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 PRAMEF27A3QJZ7 478 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 EVPLLA8MZ36 301 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 BCHEP06276 602 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 CRHP06850 196 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 DBIP07108 87 aaKnown RBP11.25□□□□□ -0.61
PTCD1-205ENST00000485746 PRF1P14222 555 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 PRKCAP17252 672 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 PPIBP23284 216 aaKnown RBP11.25□□□□□ -0.61
PTCD1-205ENST00000485746 ELK4P28324 431 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 KIR2DL3P43628 341 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 SLC6A8P48029 635 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 CTBP2P56545 445 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 TLE4Q04727 773 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 MERTKQ12866 999 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 SKP2Q13309 424 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 GTF2IRD2BQ6EKJ0 949 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 GTF2IRD2Q86UP8 949 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 GGNQ86UU5 652 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 FUNDC1Q8IVP5 155 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 ZG16BQ96DA0 208 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 ARSGQ96EG1 525 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM120AQ9BXJ8 343 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
PTCD1-205ENST00000485746 SLC38A1Q9H2H9 487 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 ARMC7Q9H6L4 198 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM45AQ9NWC5 275 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 PACSIN3Q9UKS6 424 aa11.25□□□□□ -0.61
PTCD1-205ENST00000485746 CLDN24A6NM45 220 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 ANGPT2O15123 496 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 TFPIP10646 304 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 UQCRBP14927 111 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 IL11P20809 199 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 PSMA4P25789 261 aaKnown RBP11.24□□□□□ -0.61
PTCD1-205ENST00000485746 CPOXP36551 454 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 PGM1P36871 562 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 KCNJ5P48544 419 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 ARFIP2P53365 341 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 DLX5P56178 289 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 SESN3P58005 492 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 GUCY1A3Q02108 690 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 SELENBP1Q13228 472 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 LARS2Q15031 903 aaKnown RBP11.24□□□□□ -0.61
PTCD1-205ENST00000485746 RGNQ15493 299 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 LIN52Q52LA3 116 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 FBXW10Q5XX13 1052 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 CMIPQ8IY22 773 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 OR52P1PQ8NH57 321 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 STON2Q8WXE9 905 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 ST8SIA1Q92185 356 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 PMM1Q92871 262 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 TRIM8Q9BZR9 551 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 FGFR1OP2Q9NVK5 253 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 LEF1Q9UJU2 399 aaPredicted RBP11.24□□□□□ -0.61
PTCD1-205ENST00000485746 CORO2BQ9UQ03 480 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 NDUFAF1Q9Y375 327 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 EMC9Q9Y3B6 208 aa11.24□□□□□ -0.61
PTCD1-205ENST00000485746 SPIN1Q9Y657 262 aaPredicted RBP11.24□□□□□ -0.61
PTCD1-205ENST00000485746 NCOA6Q14686 2063 aaPredicted RBP11.24□□□□□ -0.61
PTCD1-205ENST00000485746 UTP20O75691 2785 aaKnown RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 PTPN13Q12923 2485 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 A0A0G2JPF8 293 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 A0A1W2PP18 115 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 TUBAL3A6NHL2 446 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 AGAP5A6NIR3 686 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 HNRNPCL2B2RXH8 293 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 HNRNPCL3B7ZW38 293 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 ADAMDEC1O15204 470 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 ATP8B1O43520 1251 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 HNRNPCL1O60812 293 aaKnown RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 AQP8O94778 261 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 PABPC4LP0CB38 370 aaKnown RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 HNRNPCL4P0DMR1 293 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 CAPN3P20807 821 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 APOBEC1P41238 236 aaKnown RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 IDH2P48735 452 aaKnown RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 FADDQ13158 208 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 RPS26P11Q5JNZ5 115 aaPredicted RBP11.23□□□□□ -0.61
PTCD1-205ENST00000485746 GCNT6Q5T4J0 391 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 METTL21CQ5VZV1 264 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 C3orf33Q6P1S2 294 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 TMEM200AQ86VY9 491 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 VRK2Q86Y07 508 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 ZZZ3Q8IYH5 903 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 ZNF295-AS1Q8N0V1 137 aa11.23□□□□□ -0.61
PTCD1-205ENST00000485746 SLC38A5Q8WUX1 472 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms