RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 TCEA1P23193 301 aaKnown RBP16.03■□□□□ 0.16
SREBF1-213ENST00000485080 SLC6A8P48029 635 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 GYS2P54840 703 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 GNGT1P63211 74 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 RBBP4Q09028 425 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 CYLC2Q14093 348 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-213ENST00000485080 RNF220Q5VTB9 566 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 NET1Q7Z628 596 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-213ENST00000485080 GGNQ86UU5 652 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 OR5M1Q8NGP8 315 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 OR52P1PQ8NH57 321 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 BBS10Q8TAM1 723 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 WDR60Q8WVS4 1066 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 MAL2Q969L2 176 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 SLC35B4Q969S0 331 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 SDCCAG3Q96C92 435 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 RNF145Q96MT1 663 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 ZFP3Q96NJ6 502 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 THUMPD3Q9BV44 507 aaKnown RBP16.03■□□□□ 0.16
SREBF1-213ENST00000485080 KAT8Q9H7Z6 458 aaKnown RBP16.03■□□□□ 0.16
SREBF1-213ENST00000485080 CLCF1Q9UBD9 225 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 Q9UFV3 132 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 IFT52Q9Y366 437 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 PKDREJQ9NTG1 2253 aa16.03■□□□□ 0.16
SREBF1-213ENST00000485080 CDHR4A6H8M9 788 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 HSPB2A8KAH6 182 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 FXYD1O00168 92 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 BCAS1O75363 584 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 NUDT14O95848 222 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 RNF144AP50876 292 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 SUCLG1P53597 346 aaKnown RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 CLDN20P56880 219 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 EEF1A1P68104 462 aaKnown RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 CDK6Q00534 326 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 LARS2Q15031 903 aaKnown RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 QPRTQ15274 297 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 TOMM34Q15785 309 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 HSPB2Q16082 182 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 LIN52Q52LA3 116 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 REEP3Q6NUK4 255 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 CPLX4Q7Z7G2 160 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 SERPINA11Q86U17 422 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 SNX32Q86XE0 403 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 ZNF440Q8IYI8 595 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 PCYOX1LQ8NBM8 494 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 OR8J3Q8NGG0 315 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 RP9Q8TA86 221 aaKnown RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 TMEM234Q8WY98 164 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 ZNF524Q96C55 264 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 LRRC58Q96CX6 371 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 ADGRG7Q96K78 797 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 NPAS1Q99742 590 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 TM9SF2Q99805 663 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 SH3GL1Q99961 368 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 CCDC106Q9BWC9 280 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 SPATA9Q9BWV2 254 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 MYLK2Q9H1R3 596 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 ACER3Q9NUN7 267 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 PAQR5Q9NXK6 330 aaPredicted RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 DNAJB12Q9NXW2 375 aaKnown RBP16.02■□□□□ 0.16
SREBF1-213ENST00000485080 ZNF232Q9UNY5 417 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 ZNF175Q9Y473 711 aa16.02■□□□□ 0.16
SREBF1-213ENST00000485080 CELSR2Q9HCU4 2923 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 MED12LQ86YW9 2145 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 CLDN24A6NM45 220 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 CLCA1A8K7I4 914 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 KDM4EB2RXH2 506 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-213ENST00000485080 SHISA8B8ZZ34 492 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 C5orf58C9J3I9 102 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 H3BML4 177 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 EFNA2O43921 213 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 IL2RAP01589 272 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 ME2P23368 584 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 SESN3P58005 492 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 RPS3AP61247 264 aaKnown RBP16.01■□□□□ 0.15
SREBF1-213ENST00000485080 SRYQ05066 204 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 FOXF1Q12946 379 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 CDSNQ15517 529 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 MMEL1Q495T6 779 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 MRPL2Q5T653 305 aaKnown RBP16.01■□□□□ 0.15
SREBF1-213ENST00000485080 REP15Q6BDI9 236 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 NANOGP8Q6NSW7 305 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 ESPNLQ6ZVH7 1005 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 PIGWQ7Z7B1 504 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 MTDHQ86UE4 582 aaKnown RBP16.01■□□□□ 0.15
SREBF1-213ENST00000485080 TMCO5AQ8N6Q1 288 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 FBXO27Q8NI29 283 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 CA5BP1Q8WTZ4 195 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 CNOT9Q92600 299 aaKnown RBP16.01■□□□□ 0.15
SREBF1-213ENST00000485080 TRIB1Q96RU8 372 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 NANOGQ9H9S0 305 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 ARMCX1Q9P291 453 aa16.01■□□□□ 0.15
SREBF1-213ENST00000485080 ZNF629Q9UEG4 869 aaPredicted RBP16.01■□□□□ 0.15
SREBF1-213ENST00000485080 ANKHD1Q8IWZ3 2542 aaKnown RBP16■□□□□ 0.15
SREBF1-213ENST00000485080 LOC100653049A0A140TA62 436 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 MRASO14807 208 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 KRT34O76011 436 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 RCBTB2O95199 551 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 IL18BPO95998 194 aa16■□□□□ 0.15
SREBF1-213ENST00000485080 SLC6A2P23975 617 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms