RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 MOAP1Q96BY2 351 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 PPCDCQ96CD2 204 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 RNFT2Q96EX2 444 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 TPD52L3Q96J77 140 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 ZNF514Q96K75 400 aaPredicted RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 APOLD1Q96LR9 279 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 C5orf34Q96MH7 638 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 TSSK3Q96PN8 268 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 VPS35Q96QK1 796 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 C7orf50Q9BRJ6 194 aaKnown RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 INPP5KQ9BT40 448 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 ZSCAN5AQ9BUG6 496 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 POLDIP3Q9BY77 421 aaKnown RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 NLNQ9BYT8 704 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 POLR2J2Q9GZM3 115 aaKnown RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 ACTR6Q9GZN1 396 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 SRRQ9GZT4 340 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 PCBD2Q9H0N5 130 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 POLR2J3Q9H1A7 115 aaKnown RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 KCNN2Q9H2S1 579 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 RANBP3Q9H6Z4 567 aaPredicted RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 RNF121Q9H920 327 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 SLC25A19Q9HC21 320 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 FGF20Q9NP95 211 aaPredicted RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 KRCC1Q9NPI7 259 aaPredicted RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 TRIM36Q9NQ86 728 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 DECR2Q9NUI1 292 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 ABCB8Q9NUT2 735 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 RBFOX1Q9NWB1 397 aaKnown RBP4.44□□□□□ -1.7
SSBP1-211ENST00000484178 MS4A12Q9NXJ0 267 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 FBXL12Q9NXK8 326 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 B3GNT2Q9NY97 397 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 ZNF226Q9NYT6 803 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 STEAP1Q9UHE8 339 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 POU2F3Q9UKI9 436 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 DLGAP4Q9Y2H0 992 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 KLHL20Q9Y2M5 609 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 STON1Q9Y6Q2 735 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 MICAL3Q7RTP6 2002 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 MCM3APO60318 1980 aa4.44□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3DA0A087WVF3 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3IA0A087WXS9 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3EA0A087X179 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3KA0A087X1G2 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 A0A0D9SEW6 157 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 A0A1B0GVI7 797 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TRDV1A0A1B0GX56 115 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 KRT87PA6NCN2 255 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3BA6NDS4 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3FA6NER0 549 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 A8MXE2 369 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3LB9A6J9 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 C5orf58C9J3I9 102 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TLR4O00206 839 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 LDLRAD4O15165 306 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CASC3O15234 703 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TRIAP1O43715 76 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 SLC28A2O43868 658 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 PSIP1O75475 530 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 OR2C1O95371 312 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 FGF19O95750 216 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 PTHP01270 115 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 RPN2P04844 631 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ANXA4P09525 319 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TSPAN19P0C672 248 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TBC1D3HP0C7X1 549 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 PIRTP0C851 137 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CYP4B1P13584 511 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ATP1B2P14415 290 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 IDSP22304 550 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 C21orf33P30042 268 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 PPP2R1BP30154 601 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CORO1AP31146 461 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CD52P31358 61 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 GABRA5P31644 462 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CHI3L1P36222 383 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CRATP43155 626 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 OR1G1P47890 313 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 INPP1P49441 399 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ZNF41P51814 821 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 SMSP52788 366 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 AP2S1P53680 142 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 FOXL2P58012 376 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ARF5P84085 180 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 IFITM2Q01629 132 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TLE3Q04726 772 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 TMEM115Q12893 351 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 MRPL28Q13084 256 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 BAMBIQ13145 260 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 PTPRCAPQ14761 206 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 HEPACAMQ14CZ8 416 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 LARS2Q15031 903 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 PTGES3Q15185 160 aaKnown RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 SF3B4Q15427 424 aaKnown RBP eCLIP4.43□□□□□ -1.75e-6■■□□□ 12.9
SSBP1-211ENST00000484178 CHRNA6Q15825 494 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 ETFDHQ16134 617 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 CDKN3Q16667 212 aa4.43□□□□□ -1.7
SSBP1-211ENST00000484178 GLYR1Q49A26 553 aaPredicted RBP4.43□□□□□ -1.7
SSBP1-211ENST00000484178 SGO1Q5FBB7 561 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms