RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 PAMR1Q6UXH9 720 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 GCNT7Q6ZNI0 430 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 Q6ZR54 194 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CCDC121Q6ZUS5 278 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 TMCO2Q7Z6W1 182 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 GPBP1Q86WP2 473 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 HPS6Q86YV9 775 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PSTKQ8IV42 348 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CCDC50Q8IVM0 306 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CDKL3Q8IVW4 592 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SLC22A18ASQ8N1D0 253 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 LINC00612Q8N6U2 182 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ZNF321PQ8N8H1 164 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 KLHL30-AS1Q8NEE0 82 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 OR5T1Q8NG75 326 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 OR13C2Q8NGS9 318 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 NANPQ8TBE9 248 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 TEX47Q8TBZ9 253 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ADAMTS16Q8TE57 1224 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 U2AF1L4Q8WU68 220 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CCDC12Q8WUD4 166 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SCFD1Q8WVM8 642 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 DNAJA4Q8WW22 397 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SLC35B4Q969S0 331 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 CIDECQ96AQ7 238 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 ANKRD9Q96BM1 317 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 TSNARE1Q96NA8 513 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 MCCC1Q96RQ3 725 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 KCNS3Q9BQ31 491 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 BCL7BQ9BQE9 202 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 TMEM121Q9BTD3 319 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 C9orf16Q9BUW7 83 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 KRTAP4-3Q9BYR4 195 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SHCBP1LQ9BZQ2 653 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RAB17Q9H0T7 212 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RNF41Q9H4P4 317 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 IKZF5Q9H5V7 419 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 C12orf10Q9HB07 376 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 LY9Q9HBG7 655 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 AGPAT3Q9NRZ7 376 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 DCAF13Q9NV06 445 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 FAM120CQ9NX05 1096 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 MRPL39Q9NYK5 338 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SENP1Q9P0U3 644 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 STX18Q9P2W9 335 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 Q9UF83 564 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 BCAP29Q9UHQ4 241 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 VANGL2Q9ULK5 521 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SNX6Q9UNH7 406 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 EXOSC1Q9Y3B2 195 aaKnown RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 MAD1L1Q9Y6D9 718 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 SPACA6W5XKT8 324 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 HCFC1P51610 2035 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 RPAP1Q9BWH6 1393 aaPredicted RBP1.71□□□□□ -2.14
ITGB1-213ENST00000484088 PLEKHG2Q9H7P9 1386 aa1.71□□□□□ -2.14
ITGB1-213ENST00000484088 TTC21AQ8NDW8 1320 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 AGRNO00468 2067 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 GON4LQ3T8J9 2241 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 A0A075B6Q4 140 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 A0A1B0GWJ7 208 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 FAM230AA0A1W2PPH8 454 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 TTC26A0AVF1 554 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 HEATR9A2RTY3 570 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 ZSCAN5CA6NGD5 496 aaPredicted RBP1.7□□□□□ -2.14
ITGB1-213ENST00000484088 ZSCAN5BA6NJL1 495 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 TMEM210A6NLX4 147 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 SYCE1LA8MT33 242 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 NPIPA2E9PIF3 369 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 LGALS8O00214 317 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 WRBO00258 174 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 EI24O14681 340 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 XPO1O14980 1071 aaKnown RBP1.7□□□□□ -2.14
ITGB1-213ENST00000484088 HDAC3O15379 428 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 CACNG3O60359 315 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 SH3BGRLO75368 114 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 TOM1L1O75674 476 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 MYO1DO94832 1006 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 AKR7A3O95154 331 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 SLC2A10O95528 541 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 DIRAS3O95661 229 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 HPP00738 406 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 ASS1P00966 412 aaKnown RBP1.7□□□□□ -2.14
ITGB1-213ENST00000484088 AGTP01019 485 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 IFNA14P01570 189 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 RETP07949 1114 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 FGF4P08620 206 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 ALPIP09923 528 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 UBTFL1P0CB47 393 aaPredicted RBP1.7□□□□□ -2.14
ITGB1-213ENST00000484088 CT45A10P0DMU9 189 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 ATF6P18850 670 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 TSPAN8P19075 237 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 EIF2S2P20042 333 aaKnown RBP1.7□□□□□ -2.14
ITGB1-213ENST00000484088 IDSP22304 550 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 PTPRGP23470 1445 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 CFL1P23528 166 aaKnown RBP1.7□□□□□ -2.14
ITGB1-213ENST00000484088 U2AF2P26368 475 aaKnown RBP eCLIP1.7□□□□□ -2.14
ITGB1-213ENST00000484088 PTBP1P26599 531 aaKnown RBP eCLIP1.7□□□□□ -2.142e-10■■■□□ 15.4
ITGB1-213ENST00000484088 ALDH3A1P30838 453 aa1.7□□□□□ -2.14
ITGB1-213ENST00000484088 HOXA6P31267 233 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms