RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 B8ZZF3 427 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 LMO7DNF2Z398 122 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 WWP2O00308 870 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 PLD2O14939 933 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 PPM1DO15297 605 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 IDH3BO43837 385 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 SLC19A2O60779 497 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 TMCC2O75069 709 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 TRIM3O75382 744 aaPredicted RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 PRKRAO75569 313 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 AK1P00568 194 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 HLA-DQB1P01920 261 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 HLA-DPB1P04440 258 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 CHRM5P08912 532 aaPredicted RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 MSL3P1P0C860 447 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 JMJD7P0C870 316 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 GSTT2P0CG29 244 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 GSTT2BP0CG30 244 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 LIMS3P0CW19 117 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 LIMS4P0CW20 117 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 CD53P19397 219 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 PEBP1P30086 187 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 TLX1P31314 330 aaPredicted RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 IGFALSP35858 605 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 RFX2P48378 723 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 RPS25P62851 125 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 CHRNEQ04844 493 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 DUSP2Q05923 314 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 TCEA2Q15560 299 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 ARHGAP11BQ3KRB8 267 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 LCN1P1Q5VSP4 162 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 C18orf63Q68DL7 685 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 TYW3Q6IPR3 259 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 MFSD12Q6NUT3 480 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 MZT2BQ6NZ67 158 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 ZCCHC12Q6PEW1 402 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 IGF2-ASQ6U949 168 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 FRRS1Q6ZNA5 592 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 ZNF620Q6ZNG0 422 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 USP53Q70EK8 1073 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 GDF7Q7Z4P5 450 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 NRARPQ7Z6K4 114 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 ASPGQ86U10 573 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 RANBP3LQ86VV4 465 aaPredicted RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 GKN2Q86XP6 184 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 VRK2Q86Y07 508 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 RNF113BQ8IZP6 322 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 RDH10Q8IZV5 341 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 SLC43A2Q8N370 569 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 VWA5B2Q8N398 1253 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 ZNF485Q8NCK3 441 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 OR2T33Q8NG76 320 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 OR4K14Q8NGD5 310 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 OR9A2Q8NGT5 310 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 OR6F1Q8NGZ6 308 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 BRIX1Q8TDN6 353 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 ACOT12Q8WYK0 555 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 C16orf58Q96GQ5 468 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 SLC41A3Q96GZ6 507 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 ZC3HAV1LQ96H79 300 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 DIRAS2Q96HU8 199 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 FAM46AQ96IP4 442 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 C10orf90Q96M02 699 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 OR2M4Q96R27 311 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 GFM1Q96RP9 751 aaKnown RBP7.54□□□□□ -1.2
SORT1-205ENST00000483508 NRTNQ99748 197 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 KATNB1Q9BVA0 655 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 FAM117AQ9C073 453 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 MIXL1Q9H2W2 232 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 ASCL3Q9NQ33 180 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 INPP5EQ9NRR6 644 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 POU2F3Q9UKI9 436 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 TMEM5Q9Y2B1 443 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 KCNE3Q9Y6H6 103 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 U3KQA8 63 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 WDFY3Q8IZQ1 3526 aa7.54□□□□□ -1.2
SORT1-205ENST00000483508 TRAPPC13A5PLN9 417 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 K7ENP7 123 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 CASKO14936 926 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 FMO6PO60774 539 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 SOX30O94993 753 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 RASGRP1O95267 797 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 TNFP01375 233 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 DBIP07108 87 aaKnown RBP7.53□□□□□ -1.2
SORT1-205ENST00000483508 CSF3P09919 207 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 SLC35G6P0C7Q6 338 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 C8orf89P0DMQ9 161 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 MAGP20916 626 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
SORT1-205ENST00000483508 CPN2P22792 545 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 HLA-DMAP28067 261 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 MLLT3P42568 568 aaPredicted RBP7.53□□□□□ -1.2
SORT1-205ENST00000483508 RNF144AP50876 292 aaPredicted RBP7.53□□□□□ -1.2
SORT1-205ENST00000483508 PDX1P52945 283 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 BTN3A2P78410 334 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 FABP5Q01469 135 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 MXD1Q05195 221 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 DUSP8Q13202 625 aa7.53□□□□□ -1.2
SORT1-205ENST00000483508 KIR2DS3Q14952 304 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms