RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 MEP1BQ16820 701 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 TMEM44Q2T9K0 475 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 C19orf54Q5BKX5 351 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 FGD3Q5JSP0 725 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SLC25A30Q5SVS4 291 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 FAM109BQ6ICB4 259 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 FRMPD2BQ6IN97 320 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SLC48A1Q6P1K1 146 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 TUBA3EQ6PEY2 450 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 ABHD13Q7L211 337 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 ZNF367Q7RTV3 350 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 TSEN54Q7Z6J9 526 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 ASPGQ86U10 573 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 PAQR7Q86WK9 346 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 NRROSQ86YC3 692 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SFTPA1Q8IWL2 248 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 STX19Q8N4C7 294 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 DNAJC22Q8N4W6 341 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 C2orf73Q8N5S3 287 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 CAMKVQ8NCB2 501 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 OR5AK3PQ8NH89 298 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 FAM81AQ8TBF8 368 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 TBC1D15Q8TC07 691 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 DUSP19Q8WTR2 217 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 APOBEC4Q8WW27 367 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 SLC38A4Q969I6 547 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 YIPF6Q96EC8 236 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 TRNT1Q96Q11 434 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 MYOCQ99972 504 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 C17orf62Q9BQA9 187 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 DCUN1D5Q9BTE7 237 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 CDCA4Q9BXL8 241 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SLC25A32Q9H2D1 315 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SRMSQ9H3Y6 488 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 GLIPR2Q9H4G4 154 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SIAEQ9HAT2 523 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 KRCC1Q9NPI7 259 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 ZCCHC3Q9NUD5 404 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 LIN7CQ9NUP9 197 aaKnown RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 RLIMQ9NVW2 624 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 NTMQ9P121 344 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 HCN3Q9P1Z3 774 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 ERVK-18Q9QC07 812 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 SERGEFQ9UGK8 458 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 RNF6Q9Y252 685 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 KCNK6Q9Y257 313 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 IFT52Q9Y366 437 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 PCYT1BQ9Y5K3 369 aaPredicted RBP7.16□□□□□ -1.26
SNX13-208ENST00000482558 DOCK8Q8NF50 2099 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 MYO10Q9HD67 2058 aa7.16□□□□□ -1.26
SNX13-208ENST00000482558 A0A0B4J203 849 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 IGKV1-8A0A0C4DH67 115 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 KIR2DS5A0A0G2JLQ3 304 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 PRAMEF33A0A0G2JMD5 474 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 A0A0G2JNG1 304 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 A0A1W2PQF6 199 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 OR2A25A4D2G3 310 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 CLDN25C9JDP6 229 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 KIR2DS3K7RE56 304 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 XPNPEP2O43895 674 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 PRAMEF10O60809 474 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 LGI1O95970 557 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 AK1P00568 194 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 MT-ND2P03891 347 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 OPN1SWP03999 348 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 NR2F6P10588 404 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 F3P13726 295 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 PSMB9P28065 219 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 PSMB5P28074 263 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 FMO3P31513 532 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 OR1E2P47887 323 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 NPY4RP50391 375 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ZNF81P51508 661 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ILF3Q12906 894 aaKnown RBP eCLIP7.15□□□□□ -1.26
SNX13-208ENST00000482558 KIR2DS5Q14953 304 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 CTF1Q16619 201 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 DUSP7Q16829 419 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ZSWIM7Q19AV6 140 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 MAJINQ3KP22 176 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 TBRG1Q3YBR2 411 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ZNF766Q5HY98 468 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 CST9LP1Q5W188 147 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ZNF770Q6IQ21 691 aaPredicted RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 TCTN3Q6NUS6 607 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 TNFAIP8L2Q6P589 184 aaPredicted RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 ZCCHC12Q6PEW1 402 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 FIP1L1Q6UN15 594 aaKnown RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 ENPP7Q6UWV6 458 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 CASP12Q6UXS9 341 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 GDPGP1Q6ZNW5 385 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 SLC16A12Q6ZSM3 486 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 PTCHD4Q6ZW05 846 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 USP43Q70EL4 1123 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 GALNT10Q86SR1 603 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 AQP11Q8NBQ7 271 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 C7orf57Q8NEG2 295 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 KBTBD8Q8NFY9 601 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 OR8J1Q8NGP2 316 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 FNDC8Q8TC99 324 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 XAGE5Q8WWM1 108 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms