RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 BAG5Q9UL15 447 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 PRPF19Q9UMS4 504 aaKnown RBP10.64□□□□□ -0.71
HPS4-212ENST00000481910 WDR45Q9Y484 360 aa10.64□□□□□ -0.71
HPS4-212ENST00000481910 ZFHX4Q86UP3 3567 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 ELOVL7A1L3X0 281 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 FAM172BPA6NC97 362 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 OR6C70A6NIJ9 312 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 FAM220BPB1ANY3 271 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 PRSS44E7EML9 344 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 GSC2O15499 205 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 SSX5O60225 188 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 HS6ST1O60243 411 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 DNAJA2O60884 412 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 LYNP07948 512 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 CHRM4P08173 479 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 TCEA1P23193 301 aaKnown RBP10.63□□□□□ -0.71
HPS4-212ENST00000481910 MSX2P35548 267 aaPredicted RBP10.63□□□□□ -0.71
HPS4-212ENST00000481910 CLK3P49761 638 aaKnown RBP10.63□□□□□ -0.71
HPS4-212ENST00000481910 ARG2P78540 354 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 CEACAM7Q14002 265 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 MAPK11Q15759 364 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 NTRK2Q16620 822 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 RGS21Q2M5E4 152 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 FLYWCH1Q4VC44 716 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 FAM76BQ5HYJ3 339 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 RPS26P11Q5JNZ5 115 aaPredicted RBP10.63□□□□□ -0.71
HPS4-212ENST00000481910 LRRC74BQ6ZQY2 392 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 NUP54Q7Z3B4 507 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 ZAR1Q86SH2 424 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 DND1Q8IYX4 353 aaKnown RBP10.63□□□□□ -0.71
HPS4-212ENST00000481910 CYP4Z2PQ8N1L4 340 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 METTL25Q8N6Q8 603 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 FAM156AQ8NDB6 213 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 HAS2Q92819 552 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 MCUR1Q96AQ8 359 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 TMCO6Q96DC7 493 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 ABHD17AQ96GS6 310 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 TREX2Q9BQ50 279 aaPredicted RBP10.63□□□□□ -0.71
HPS4-212ENST00000481910 GON7Q9BXV9 100 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 LRMDAQ9H2I8 198 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 DCLRE1BQ9H816 532 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 LRFN1Q9P244 771 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 CD300AQ9UGN4 299 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 PCDHGB7Q9Y5F8 929 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 EXPH5Q8NEV8 1989 aa10.63□□□□□ -0.71
HPS4-212ENST00000481910 ACOD1A6NK06 481 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 DBX1A6NMT0 343 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 H3BUI4 141 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 TP53I11O14683 189 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 GSTA4O15217 222 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 PGM3O95394 542 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 S100A9P06702 114 aaKnown RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 OCM2P0CE71 109 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 OCMP0CE72 109 aaPredicted RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 CYP4B1P13584 511 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 HSD17B1P14061 328 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 AQP1P29972 269 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 PGM1P36871 562 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 EFR3AQ14156 821 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ST3GAL2Q16842 350 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 SPATS1Q496A3 300 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 SPINK14Q6IE38 97 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 TYW3Q6IPR3 259 aaKnown RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 FRRS1Q6ZNA5 592 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 SLC30A8Q8IWU4 369 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 GPALPP1Q8IXQ4 340 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 MICU2Q8IYU8 434 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 HIPK4Q8NE63 616 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 OR10G3Q8NGC4 313 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 OR4C3Q8NH37 302 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 CLPTM1LQ96KA5 538 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 SGCZQ96LD1 299 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 CMTM3Q96MX0 182 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 CADM1Q9BY67 442 aaKnown RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 SLC38A1Q9H2H9 487 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 GHITMQ9H3K2 345 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 MTHFD2LQ9H903 347 aaPredicted RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 ANGPT4Q9Y264 503 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ZNF175Q9Y473 711 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ZNF451Q9Y4E5 1061 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 EML6Q6ZMW3 1958 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 TNRC6AQ8NDV7 1962 aaKnown RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 MAP1BP46821 2468 aaKnown RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 NPIPA5A0A0B4J1W7 369 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 OR5H15A6NDH6 313 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 NPIPA7E9PJI5 369 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ICOSLGO75144 302 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 CRTAPO75718 401 aaPredicted RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 UTS2O95399 124 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ZIC2O95409 532 aaPredicted RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 NPIPA8P0DM63 369 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 AP2S1P53680 142 aaPredicted RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 VEZF1Q14119 521 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 OR1C1Q15619 314 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 COL28A1Q2UY09 1125 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 LINC00303Q3SY05 128 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 INTS11Q5TA45 600 aaKnown RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 PRAMEF8Q5VWM4 474 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 PRAMEF7Q5VXH5 474 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 SLC22A10Q63ZE4 541 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms