RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TUBA1CQ9BQE3 449 aa9.55□□□□□ -0.88
SSBP1-210ENST00000481508 TP63Q9H3D4 680 aaPredicted RBP9.55□□□□□ -0.88
SSBP1-210ENST00000481508 RLIMQ9NVW2 624 aa9.55□□□□□ -0.88
SSBP1-210ENST00000481508 CAMK2AQ9UQM7 478 aa9.55□□□□□ -0.88
SSBP1-210ENST00000481508 ZNF337Q9Y3M9 751 aa9.55□□□□□ -0.88
SSBP1-210ENST00000481508 ZNF469Q96JG9 3925 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 E9PLN8 166 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 H3BML4 177 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 GTPBP1O00178 669 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 AP3D1O14617 1153 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 DNAJA2O60884 412 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 GCM2O75603 506 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 EPPINO95925 133 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 ACTL6AO96019 429 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 GLI4P10075 376 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 ESRRAP11474 423 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 COX4I1P13073 169 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 PRKCAP17252 672 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 CHMP24386 653 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 ACVR2AP27037 513 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 MAGEA8P43361 318 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 CCR4P51679 360 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 CASP6P55212 293 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 CLDN20P56880 219 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 EEF1A1P68104 462 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 FADDQ13158 208 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 CYLC2Q14093 348 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 TRMT5Q32P41 509 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 MRPL2Q5T653 305 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 NANOGP8Q6NSW7 305 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 ZNF836Q6ZNA1 936 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 GGNQ86UU5 652 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 ZZZ3Q8IYH5 903 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 UBQLNLQ8IYU4 475 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 CLIP4Q8N3C7 705 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 NAXEQ8NCW5 288 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 OR5W2Q8NH69 310 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 FBXO27Q8NI29 283 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 WDR60Q8WVS4 1066 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 SMPDL3BQ92485 455 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 LRRC58Q96CX6 371 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 VKORC1Q9BQB6 163 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 TTYH2Q9BSA4 534 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 THUMPD3Q9BV44 507 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 LAT2Q9GZY6 243 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 NSRP1Q9H0G5 558 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 PIF1Q9H611 641 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 TMEM185BQ9H7F4 350 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 PTGES2Q9H7Z7 377 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 NANOGQ9H9S0 305 aa9.54□□□□□ -0.88
SSBP1-210ENST00000481508 DNAJB12Q9NXW2 375 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 SUCOQ9UBS9 1254 aaKnown RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 ZNF443Q9Y2A4 671 aaPredicted RBP9.54□□□□□ -0.88
SSBP1-210ENST00000481508 A0A0G2JNJ9 132 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 C7orf72A4D263 438 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 BBIP1A8MTZ0 92 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 H3BNH8 94 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 SLC22A2O15244 555 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 SEC14L5O43304 696 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 EIF4E2O60573 245 aaKnown RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 CCDC22O60826 627 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 SHOX2O60902 331 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 WDR1O75083 606 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 PGM3O95394 542 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 NTN1O95631 604 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 AVPP01185 164 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 PEPDP12955 493 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 NID1P14543 1247 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 CPN1P15169 458 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 PPIBP23284 216 aaKnown RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 MSX1P28360 303 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 AQP1P29972 269 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 ADSLP30566 484 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 MMP16P51512 607 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 ZNF41P51814 821 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 CRISP3P54108 245 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 SUMO3P55854 103 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 KCNJ10P78508 379 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 CDK6Q00534 326 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 PMPCAQ10713 525 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 SCARB2Q14108 478 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 QPRTQ15274 297 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 CTU2Q2VPK5 515 aaKnown RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 GLYR1Q49A26 553 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 NET1Q7Z628 596 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 MRGPRGQ86SM5 289 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 CCDC71Q8IV32 467 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 LIX1LQ8IVB5 337 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 GTPBP8Q8N3Z3 284 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 C9orf106Q8NAJ2 232 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 OR52P1PQ8NH57 321 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 OR10A6Q8NH74 314 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 PHF10Q8WUB8 498 aaKnown RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 ZNF775Q96BV0 537 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 ZNF845Q96IR2 970 aaPredicted RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 TRIB1Q96RU8 372 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 CCT8L2Q96SF2 557 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 RAD21L1Q9H4I0 556 aa9.53□□□□□ -0.88
SSBP1-210ENST00000481508 KAT8Q9H7Z6 458 aaKnown RBP9.53□□□□□ -0.88
SSBP1-210ENST00000481508 MTHFD2LQ9H903 347 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms