RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MICAQ29983 383 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 DCST1Q5T197 706 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 SPINK14Q6IE38 97 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 PPP4R4Q6NUP7 873 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 ZNF613Q6PF04 617 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 GALNT4Q8N4A0 578 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 FDCSPQ8NFU4 85 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 RNF217Q8TC41 542 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 GIPC3Q8TF64 312 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 NTNG2Q96CW9 530 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 PROK2Q9HC23 129 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 SACM1LQ9NTJ5 587 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 MED11Q9P086 117 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 MED13Q9UHV7 2174 aa16.03■□□□□ 0.16
UPF3A-206ENST00000480362 CPAMD8Q8IZJ3 1885 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 A0A0B4J2E0 115 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 A0A1B0GX12 115 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 G3V3Y1 287 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 FAAHO00519 579 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 CDK2AP1O14519 115 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 CCNB2O95067 398 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 LYPD3O95274 346 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 RASAL1O95294 804 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 NUDT14O95848 222 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 PGCP20142 388 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 MSX1P28360 303 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 INPP5JQ15735 1006 aaPredicted RBP16.02■□□□□ 0.16
UPF3A-206ENST00000480362 BROXQ5VW32 411 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 ANKRD34AQ69YU3 496 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 WBP2NLQ6ICG8 309 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 PODNL1Q6PEZ8 512 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 NKAIN4Q8IVV8 208 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 PSD4Q8NDX1 1056 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 ZNF563Q8TA94 476 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 GPR119Q8TDV5 335 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 ZNF524Q96C55 264 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 FRMD6Q96NE9 622 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 SIGLEC12Q96PQ1 595 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 TACO1Q9BSH4 297 aaKnown RBP16.02■□□□□ 0.16
UPF3A-206ENST00000480362 FUZQ9BT04 418 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 DSN1Q9H410 356 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 ANKRD19PQ9H560 264 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 SMURF2Q9HAU4 748 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 HHATLQ9HCP6 504 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 TIMMDC1Q9NPL8 285 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 HRH3Q9Y5N1 445 aa16.02■□□□□ 0.16
UPF3A-206ENST00000480362 IGLV3-32A0A0A0MS00 114 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 SH3PXD2BA1X283 911 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 ANKUB1A6NFN9 424 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 B4DXG7 233 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 EI24O14681 340 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 NEURL1O76050 574 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 SNX4O95219 450 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 NTN1O95631 604 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 TLE3Q04726 772 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 SEC23BQ15437 767 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 OR1C1Q15619 314 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 TOMM34Q15785 309 aaPredicted RBP16.01■□□□□ 0.15
UPF3A-206ENST00000480362 ULK3Q6PHR2 472 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 LRRC69Q6ZNQ3 347 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 WDSUB1Q8N9V3 476 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 OR2M3Q8NG83 312 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 OR10G2Q8NGC3 310 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 SLC7A13Q8TCU3 470 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 MAGEE2Q8TD90 523 aaPredicted RBP16.01■□□□□ 0.15
UPF3A-206ENST00000480362 SLC38A4Q969I6 547 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 PRSS27Q9BQR3 290 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 OSBPL10Q9BXB5 764 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 GABARAPL1Q9H0R8 117 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 SELENONQ9NZV5 590 aa16.01■□□□□ 0.15
UPF3A-206ENST00000480362 SPTBN2O15020 2390 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 A0A087WUU8 490 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 OR5H15A6NDH6 313 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 GNB5O14775 395 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 CHP2O43745 196 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 CDC40O60508 579 aaKnown RBP eCLIP16■□□□□ 0.15
UPF3A-206ENST00000480362 CEACAM4O75871 244 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 GP1BBP13224 206 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 CNR1P21554 472 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 DNASE1L1P49184 302 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 SUMO3P55854 103 aaPredicted RBP16■□□□□ 0.15
UPF3A-206ENST00000480362 KCNAB2Q13303 367 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 DAG1Q14118 895 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 QPRTQ15274 297 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 ALG10BQ5I7T1 473 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 PACS2Q86VP3 889 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 PLCZ1Q86YW0 608 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 PACRGLQ8N7B6 248 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 DNAJA4Q8WW22 397 aaPredicted RBP16■□□□□ 0.15
UPF3A-206ENST00000480362 C3orf49Q96BT1 292 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 RNF32Q9H0A6 362 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 VCXQ9H320 206 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 C8orf4Q9NR00 106 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 TAS2R10Q9NYW0 307 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 RAXQ9Y2V3 346 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 EML6Q6ZMW3 1958 aa16■□□□□ 0.15
UPF3A-206ENST00000480362 HEATR5AQ86XA9 2040 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 SNPHO15079 494 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 MST1P26927 711 aa15.99■□□□□ 0.15
UPF3A-206ENST00000480362 SLC1A3P43003 542 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms