RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC25A15Q9Y619 301 aa15.11■□□□□ 0.01
VIM-204ENST00000478746 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 A0A1W2PR80 420 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 CCT8L1PA6NM43 557 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 ZNF724A8MTY0 619 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 NDUFS8O00217 210 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 ALOX5P09917 674 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 IMPDH1P20839 514 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 APOBEC3AP31941 199 aaPredicted RBP15.1■□□□□ 0.01
VIM-204ENST00000478746 SERPINB9P50453 376 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 P2RX1P51575 399 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 PKNOX1P55347 436 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 DUSP5Q16690 384 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 IMPG1Q17R60 797 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 CR1LQ2VPA4 569 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 CCNJQ5T5M9 372 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 CBLN3Q6UW01 205 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 LRIG3Q6UXM1 1119 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 IKBIPQ70UQ0 350 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 MEX3DQ86XN8 651 aaKnown RBP15.1■□□□□ 0.01
VIM-204ENST00000478746 FAM76AQ8TAV0 307 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 GIMAP5Q96F15 307 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 FOXN4Q96NZ1 517 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 TMEM237Q96Q45 408 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 KCNA7Q96RP8 456 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 C1QTNF6Q9BXI9 259 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 NTMQ9P121 344 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 CARD8Q9Y2G2 431 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 STK38LQ9Y2H1 464 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 ACTL7BQ9Y614 415 aa15.1■□□□□ 0.01
VIM-204ENST00000478746 DYSFO75923 2080 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 SMAD9O15198 467 aaKnown RBP15.09■□□□□ 0.01
VIM-204ENST00000478746 PDPK1O15530 556 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 OIP5O43482 229 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 HSPA4LO95757 839 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 TOMM34Q15785 309 aaPredicted RBP15.09■□□□□ 0.01
VIM-204ENST00000478746 IQCCQ4KMZ1 466 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 FBXW9Q5XUX1 488 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 NOXRED1Q6NXP6 359 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 COX18Q8N8Q8 333 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 GPR119Q8TDV5 335 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 C16orf58Q96GQ5 468 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 EGLN2Q96KS0 407 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 MRGPRX4Q96LA9 322 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 C16orf45Q96MC5 204 aaPredicted RBP15.09■□□□□ 0.01
VIM-204ENST00000478746 FKRPQ9H9S5 495 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 ICAM5Q9UMF0 924 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 FKBP7Q9Y680 259 aa15.09■□□□□ 0.01
VIM-204ENST00000478746 ARFGEF3Q5TH69 2177 aa15.08■□□□□ 0.01
VIM-204ENST00000478746 IGHV4-61A0A0C4DH41 118 aa15.08■□□□□ 0
VIM-204ENST00000478746 TRIM49D1C9J1S8 452 aa15.08■□□□□ 0
VIM-204ENST00000478746 H3BNH8 94 aa15.08■□□□□ 0
VIM-204ENST00000478746 GTPBP1O00178 669 aaKnown RBP15.08■□□□□ 0
VIM-204ENST00000478746 IGHV3-9P01782 118 aa15.08■□□□□ 0
VIM-204ENST00000478746 PRKCAP17252 672 aa15.08■□□□□ 0
VIM-204ENST00000478746 ITGA2P17301 1181 aa15.08■□□□□ 0
VIM-204ENST00000478746 SUMO3P55854 103 aaPredicted RBP15.08■□□□□ 0
VIM-204ENST00000478746 ETF1P62495 437 aaKnown RBP15.08■□□□□ 0
VIM-204ENST00000478746 POU6F2P78424 691 aaPredicted RBP15.08■□□□□ 0
VIM-204ENST00000478746 LCP2Q13094 533 aa15.08■□□□□ 0
VIM-204ENST00000478746 SELENBP1Q13228 472 aa15.08■□□□□ 0
VIM-204ENST00000478746 CARTPTQ16568 116 aa15.08■□□□□ 0
VIM-204ENST00000478746 ZCCHC12Q6PEW1 402 aa15.08■□□□□ 0
VIM-204ENST00000478746 ZFP28Q8NHY6 868 aa15.08■□□□□ 0
VIM-204ENST00000478746 CIDECQ96AQ7 238 aaPredicted RBP15.08■□□□□ 0
VIM-204ENST00000478746 ARL8AQ96BM9 186 aa15.08■□□□□ 0
VIM-204ENST00000478746 OTUB1Q96FW1 271 aaPredicted RBP15.08■□□□□ 0
VIM-204ENST00000478746 MS4A4EQ96PG1 132 aa15.08■□□□□ 0
VIM-204ENST00000478746 OR5B2Q96R09 309 aa15.08■□□□□ 0
VIM-204ENST00000478746 TRMOQ9BU70 441 aa15.08■□□□□ 0
VIM-204ENST00000478746 BTBD2Q9BX70 525 aa15.08■□□□□ 0
VIM-204ENST00000478746 ADAM19Q9H013 955 aa15.08■□□□□ 0
VIM-204ENST00000478746 NINJ2Q9NZG7 142 aa15.08■□□□□ 0
VIM-204ENST00000478746 TENM1Q9UKZ4 2725 aa15.08■□□□□ 0
VIM-204ENST00000478746 LOC390937A0A1W2PQ73 354 aa15.07■□□□□ 0
VIM-204ENST00000478746 CASQ1P31415 396 aa15.07■□□□□ 0
VIM-204ENST00000478746 SRP14P37108 136 aaKnown RBP15.07■□□□□ 0
VIM-204ENST00000478746 RNF144AP50876 292 aaPredicted RBP15.07■□□□□ 0
VIM-204ENST00000478746 KLHL26Q53HC5 615 aa15.07■□□□□ 0
VIM-204ENST00000478746 OR7E24Q6IFN5 339 aa15.07■□□□□ 0
VIM-204ENST00000478746 ANKRD26P1Q6NSI1 321 aa15.07■□□□□ 0
VIM-204ENST00000478746 ZNF527Q8NB42 609 aa15.07■□□□□ 0
VIM-204ENST00000478746 JADE3Q92613 823 aa15.07■□□□□ 0
VIM-204ENST00000478746 FBXO17Q96EF6 278 aa15.07■□□□□ 0
VIM-204ENST00000478746 CHMP6Q96FZ7 201 aa15.07■□□□□ 0
VIM-204ENST00000478746 MUS81Q96NY9 551 aa15.07■□□□□ 0
VIM-204ENST00000478746 PAFAH2Q99487 392 aa15.07■□□□□ 0
VIM-204ENST00000478746 HOXD1Q9GZZ0 328 aa15.07■□□□□ 0
VIM-204ENST00000478746 MID1IP1Q9NPA3 183 aa15.07■□□□□ 0
VIM-204ENST00000478746 ZDHHC18Q9NUE0 388 aa15.07■□□□□ 0
VIM-204ENST00000478746 GIN1Q9NXP7 522 aa15.07■□□□□ 0
VIM-204ENST00000478746 EMC3Q9P0I2 261 aa15.07■□□□□ 0
VIM-204ENST00000478746 TMEM216Q9P0N5 145 aa15.07■□□□□ 0
VIM-204ENST00000478746 ZNF23P17027 643 aa15.06■□□□□ 0
VIM-204ENST00000478746 ATP6V1C1P21283 382 aa15.06■□□□□ 0
VIM-204ENST00000478746 ATP5F1P24539 256 aaPredicted RBP15.06■□□□□ 0
VIM-204ENST00000478746 FOXA1P55317 472 aa15.06■□□□□ 0
VIM-204ENST00000478746 PHC1P78364 1004 aa15.06■□□□□ 0
VIM-204ENST00000478746 SLC7A5Q01650 507 aa15.06■□□□□ 0
VIM-204ENST00000478746 SWI5Q1ZZU3 235 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms