RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 RAET1LQ5VY80 246 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 ENPP6Q6UWR7 440 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 CD163Q86VB7 1156 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 TMCO5AQ8N6Q1 288 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 PRDM14Q9GZV8 571 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 ARMC7Q9H6L4 198 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 CHST2Q9Y4C5 530 aa24.22■■□□□ 1.47
CCM2-211ENST00000478582 FAM220BPB1ANY3 271 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 GCM2O75603 506 aaPredicted RBP24.21■■□□□ 1.47
CCM2-211ENST00000478582 SERPINB7O75635 380 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 CYP7B1O75881 506 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 NUDT14O95848 222 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 FREM3P0C091 2139 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 CPN1P15169 458 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 PGCP20142 388 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 PSMA4P25789 261 aaKnown RBP24.21■■□□□ 1.47
CCM2-211ENST00000478582 COL8A1P27658 744 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 ADH6P28332 368 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 PRKAR1BP31321 381 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 EIF1P41567 113 aaKnown RBP24.21■■□□□ 1.47
CCM2-211ENST00000478582 SLC6A8P48029 635 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 CPA2P48052 419 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 BCL2A1Q16548 175 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 SLC25A53Q5H9E4 307 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 INTS11Q5TA45 600 aaKnown RBP24.21■■□□□ 1.47
CCM2-211ENST00000478582 ZNF440Q8IYI8 595 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 PM20D2Q8IYS1 436 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 POC1BQ8TC44 478 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 SLC35B4Q969S0 331 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 WDYHV1Q96HA8 205 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 TP63Q9H3D4 680 aaPredicted RBP24.21■■□□□ 1.47
CCM2-211ENST00000478582 PIF1Q9H611 641 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 PNPLA3Q9NST1 481 aa24.21■■□□□ 1.47
CCM2-211ENST00000478582 ESRRAP11474 423 aaPredicted RBP24.2■■□□□ 1.46
CCM2-211ENST00000478582 LHX2P50458 406 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 CCR4P51679 360 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 MNAT1P51948 309 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 SLC7A2P52569 658 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 DLX5P56178 289 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 PSME3P61289 254 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 TOMM34Q15785 309 aaPredicted RBP24.2■■□□□ 1.46
CCM2-211ENST00000478582 DCST1Q5T197 706 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 DHRS4L2Q6PKH6 230 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 CCDC80Q76M96 950 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 PATL1Q86TB9 770 aaKnown RBP24.2■■□□□ 1.46
CCM2-211ENST00000478582 CLIP4Q8N3C7 705 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 ITLN2Q8WWU7 325 aaPredicted RBP24.2■■□□□ 1.46
CCM2-211ENST00000478582 NSL1Q96IY1 281 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 RSPO3Q9BXY4 272 aaPredicted RBP24.2■■□□□ 1.46
CCM2-211ENST00000478582 RLIMQ9NVW2 624 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 ABCD2Q9UBJ2 740 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 ZNF337Q9Y3M9 751 aa24.2■■□□□ 1.46
CCM2-211ENST00000478582 DNAJC13O75165 2243 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 TNFSF12-TNFSF13A0A0A6YY99 330 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 PRORSD1PA6NEY8 169 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 CCT8L1PA6NM43 557 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 FAAHO00519 579 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 NME4O00746 187 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 WDR1O75083 606 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 MFN2O95140 757 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 NTN1O95631 604 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 HOXD4P09016 255 aaPredicted RBP24.19■■□□□ 1.46
CCM2-211ENST00000478582 PRKCAP17252 672 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 TCEA1P23193 301 aaKnown RBP24.19■■□□□ 1.46
CCM2-211ENST00000478582 QPRTQ15274 297 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 EID3Q8N140 333 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 BHLHE22Q8NFJ8 381 aaPredicted RBP24.19■■□□□ 1.46
CCM2-211ENST00000478582 OR2T12Q8NG77 320 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 OR5M9Q8NGP3 310 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 OR5M1Q8NGP8 315 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 ST8SIA1Q92185 356 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 ZNF524Q96C55 264 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 MRGPRX4Q96LA9 322 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 NPAS1Q99742 590 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 AP4B1Q9Y6B7 739 aa24.19■■□□□ 1.46
CCM2-211ENST00000478582 NAV2Q8IVL1 2488 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 FIGNL2A6NMB9 653 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 AHRRA9YTQ3 701 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 M0QX08 132 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 ADAM11O75078 769 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 PEPDP12955 493 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 GABRA1P14867 456 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 ZNF708P17019 499 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 AQP1P29972 269 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 STARP49675 285 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 EEFSECP57772 596 aaKnown RBP24.18■■□□□ 1.46
CCM2-211ENST00000478582 LIPEQ05469 1076 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 RPTNQ6XPR3 784 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 MRGPRGQ86SM5 289 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 ZNF808Q8N4W9 903 aaPredicted RBP24.18■■□□□ 1.46
CCM2-211ENST00000478582 TMEM234Q8WY98 164 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 USP22Q9UPT9 525 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 MEMO1Q9Y316 297 aa24.18■■□□□ 1.46
CCM2-211ENST00000478582 CFAP73A6NFT4 308 aa24.17■■□□□ 1.46
CCM2-211ENST00000478582 SHISA8B8ZZ34 492 aa24.17■■□□□ 1.46
CCM2-211ENST00000478582 E9PLN8 166 aa24.17■■□□□ 1.46
CCM2-211ENST00000478582 PTGER4P35408 488 aa24.17■■□□□ 1.46
CCM2-211ENST00000478582 ACAA2P42765 397 aaKnown RBP24.17■■□□□ 1.46
CCM2-211ENST00000478582 CLDN18P56856 261 aa24.17■■□□□ 1.46
CCM2-211ENST00000478582 EPS8Q12929 822 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms