RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 DMRTA2Q96SC8 542 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 TUBA1CQ9BQE3 449 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 CCDC106Q9BWC9 280 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 LAT2Q9GZY6 243 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 MTHFD2LQ9H903 347 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 RLIMQ9NVW2 624 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF443Q9Y2A4 671 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-215ENST00000478531 PKDREJQ9NTG1 2253 aa6.23□□□□□ -1.41
BRCA1-215ENST00000478531 A0A0G2JPF8 293 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 HNRNPCL2B2RXH8 293 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 HNRNPCL3B7ZW38 293 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 EIF1AYO14602 144 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 HNRNPCL1O60812 293 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PGM3O95394 542 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 LINGO3P0C6S8 592 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GKN3PP0CG01 181 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 HNRNPCL4P0DMR1 293 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 BMP2P12643 396 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF708P17019 499 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PRKCAP17252 672 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GPX2P18283 190 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PGCP20142 388 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 IL11P20809 199 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 SFTPDP35247 375 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ADH7P40394 386 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 NUDT2P50583 147 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 SMSP52788 366 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PLAURQ03405 335 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 LARS2Q15031 903 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ADRM1Q16186 407 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF311Q5JNZ3 666 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 TMEM211Q6ICI0 200 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 NANOGP8Q6NSW7 305 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CHMP1BQ7LBR1 199 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CCDC71Q8IV32 467 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GTPBP8Q8N3Z3 284 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 MEIOBQ8N635 442 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 C11orf65Q8NCR3 313 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 FAM71CQ8NEG0 241 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 FBXO27Q8NI29 283 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 RP9Q8TA86 221 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 POC1BQ8TC44 478 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 RND1Q92730 232 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF524Q96C55 264 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 SDCCAG3Q96C92 435 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CCT8L2Q96SF2 557 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 TTYH2Q9BSA4 534 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 MYLK2Q9H1R3 596 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 KAT8Q9H7Z6 458 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 NANOGQ9H9S0 305 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GID8Q9NWU2 228 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 DNAJB12Q9NXW2 375 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 COQ3Q9NZJ6 369 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ANGPT4Q9Y264 503 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ARL2BPQ9Y2Y0 163 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 HRNRQ86YZ3 2850 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CDHR4A6H8M9 788 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 FAM90A27PA6NNH2 459 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CLCA1A8K7I4 914 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 AHRRA9YTQ3 701 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 AP3D1O14617 1153 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 TNFSF11O14788 317 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 FRS3O43559 492 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ADAM11O75078 769 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 OPN1SWP03999 348 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PABPC4LP0CB38 370 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GLI4P10075 376 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CPN1P15169 458 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF16P17020 682 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PTGER4P35408 488 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 EIF1P41567 113 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 EIF1AXP47813 144 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CPA2P48052 419 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 SUCLG1P53597 346 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 MERTKQ12866 999 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 TMEM44Q2T9K0 475 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GLYR1Q49A26 553 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GKAP1Q5VSY0 366 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PIGWQ7Z7B1 504 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 KRT73Q86Y46 540 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PTOV1Q86YD1 416 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 GRAMD2AQ8IUY3 354 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 LACC1Q8IV20 430 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CMIPQ8IY22 773 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZZZ3Q8IYH5 903 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 LILRA2Q8N149 483 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF808Q8N4W9 903 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 HIPK4Q8NE63 616 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 OR8J3Q8NGG0 315 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PHF10Q8WUB8 498 aaKnown RBP6.22□□□□□ -1.41
BRCA1-215ENST00000478531 OIT3Q8WWZ8 545 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 CMTM5Q96DZ9 223 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF607Q96SK3 696 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ECSITQ9BQ95 431 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 PINK1Q9BXM7 581 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 TMEM38AQ9H6F2 299 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 STOML1Q9UBI4 398 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ADAM21Q9UKJ8 722 aa6.22□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms