RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 YRDCQ86U90 279 aaKnown RBP0.98□□□□□ -2.25
HPS3-205ENST00000478525 ARFGAP2Q8N6H7 521 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 FAM86B1Q8N7N1 296 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 WDR36Q8NI36 951 aaKnown RBP0.98□□□□□ -2.25
HPS3-205ENST00000478525 SYNPRQ8TBG9 265 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 FOXC2Q99958 501 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 TMEM121Q9BTD3 319 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 NDUFAF3Q9BU61 184 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 SLC25A37Q9NYZ2 338 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 COPS7AQ9UBW8 275 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 KAT6BQ8WYB5 2073 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 PDS5BQ9NTI5 1447 aa0.98□□□□□ -2.25
HPS3-205ENST00000478525 MUC16Q8WXI7 14507 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 PIKFYVEQ9Y2I7 2098 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 TTC26A0AVF1 554 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 ZNF705GA8MUZ8 300 aaPredicted RBP0.97□□□□□ -2.25
HPS3-205ENST00000478525 ENTPD5O75356 428 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 ALPPP05187 535 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 ICAM2P13598 275 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 MAGEA4P43358 317 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 NOVA1P51513 510 aaKnown RBP0.97□□□□□ -2.25
HPS3-205ENST00000478525 TAS2R19P59542 299 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 SLC10A7Q0GE19 358 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 RSPO1Q2MKA7 263 aaPredicted RBP0.97□□□□□ -2.25
HPS3-205ENST00000478525 NCR3LG1Q68D85 454 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 C19orf35Q6ZS72 473 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 FAM47EQ6ZV65 393 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 KCTD9Q7L273 389 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 GOLGA7Q7Z5G4 137 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 MFSD6LQ8IWD5 586 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 NRMQ8IXM6 262 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 ACER1Q8TDN7 264 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 NDRG1Q92597 394 aaKnown RBP0.97□□□□□ -2.25
HPS3-205ENST00000478525 BCL2L2Q92843 193 aaPredicted RBP0.97□□□□□ -2.25
HPS3-205ENST00000478525 OSBPL8Q9BZF1 889 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 ABCG4Q9H172 646 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 MAD2L2Q9UI95 211 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 XPO7Q9UIA9 1087 aaKnown RBP0.97□□□□□ -2.25
HPS3-205ENST00000478525 MAD1L1Q9Y6D9 718 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 YEATS2Q9ULM3 1422 aa0.97□□□□□ -2.25
HPS3-205ENST00000478525 A4D1N5 150 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 CASKO14936 926 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 ALOX15BO15296 676 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 RRP8O43159 456 aaKnown RBP0.96□□□□□ -2.26
HPS3-205ENST00000478525 FIBPO43427 364 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 NME2P1O60361 137 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 MPZL1O95297 269 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 LDHCP07864 332 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 BCKDHAP12694 445 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 CXCL5P42830 114 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 RBP5P82980 135 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 NME3Q13232 169 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 AGKQ53H12 422 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 CTRB2Q6GPI1 263 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 UBALD2Q8IYN6 164 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 SYCP3Q8IZU3 236 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 NEK11Q8NG66 645 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 ESR2Q92731 530 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 CYP2S1Q96SQ9 504 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 TSG101Q99816 390 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 AKIRIN1Q9H9L7 192 aaPredicted RBP0.96□□□□□ -2.26
HPS3-205ENST00000478525 NGBQ9NPG2 151 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 TREM2Q9NZC2 230 aa0.96□□□□□ -2.26
HPS3-205ENST00000478525 ZNF230Q9UIE0 474 aaPredicted RBP0.96□□□□□ -2.26
HPS3-205ENST00000478525 ZNF407Q9C0G0 2248 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 IGLV11-55A0A075B6I3 123 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 A0A1B0GWB2 263 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 C5orf51A6NDU8 294 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 H0YL77 283 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 HCRTR1O43613 425 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 TBCAO75347 108 aaKnown RBP0.95□□□□□ -2.26
HPS3-205ENST00000478525 HSPA4LO95757 839 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 P0C880 135 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 PPIAL4GP0DN37 164 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 UROSP10746 265 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 SCG2P13521 617 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 NMT1P30419 496 aaKnown RBP0.95□□□□□ -2.26
HPS3-205ENST00000478525 HERVK_113P63132 956 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 ERVK-8P63133 956 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 C17orf67Q0P5P2 114 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 GRB7Q14451 532 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 ZSWIM7Q19AV6 140 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 TYSND1Q2T9J0 566 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 PRAMEF7Q5VXH5 474 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 C1orf186Q6ZWK4 172 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 MS4A14Q96JA4 679 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 KLHDC3Q9BQ90 382 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 CBWD1Q9BRT8 395 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 FAM213AQ9BRX8 229 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 TBC1D10AQ9BXI6 508 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 ERVK-6Q9BXR3 956 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 KIF25Q9UIL4 384 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 PLEKHH1Q9ULM0 1364 aa0.95□□□□□ -2.26
HPS3-205ENST00000478525 RAD54L2Q9Y4B4 1467 aa0.94□□□□□ -2.26
HPS3-205ENST00000478525 LTBP4Q8N2S1 1624 aa0.94□□□□□ -2.26
HPS3-205ENST00000478525 IGHV3OR16-13A0A075B7E8 117 aa0.94□□□□□ -2.26
HPS3-205ENST00000478525 ARPC4-TTLL3A0A0A6YYG9 625 aa0.94□□□□□ -2.26
HPS3-205ENST00000478525 GSAPA4D1B5 854 aa0.94□□□□□ -2.26
HPS3-205ENST00000478525 CCDC69A6NI79 296 aa0.94□□□□□ -2.26
HPS3-205ENST00000478525 C16orf90A8MZG2 172 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms