RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 HEATR5AQ86XA9 2040 aa20.97■□□□□ 0.95
C9orf3-215ENST00000478473 TNFSF11O14788 317 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 SMNDC1O75940 238 aaKnown RBP eCLIP20.96■□□□□ 0.95
C9orf3-215ENST00000478473 HRGP04196 525 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 PGM1P36871 562 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 CBFBQ13951 182 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 TNFAIP8L2Q6P589 184 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-215ENST00000478473 MSANTD1Q6ZTZ1 278 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 EIF3MQ7L2H7 374 aaKnown RBP20.96■□□□□ 0.95
C9orf3-215ENST00000478473 ZNF619Q8N2I2 560 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 PMM1Q92871 262 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 RAB8BQ92930 207 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 CPNE4Q96A23 557 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-215ENST00000478473 TRNT1Q96Q11 434 aaKnown RBP20.96■□□□□ 0.95
C9orf3-215ENST00000478473 ZBTB18Q99592 522 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 SLC39A3Q9BRY0 314 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 INPP5KQ9BT40 448 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 OPN3Q9H1Y3 402 aaPredicted RBP20.96■□□□□ 0.95
C9orf3-215ENST00000478473 CXXC4Q9H2H0 198 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 ST6GALNAC2Q9UJ37 374 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 SLC35A3Q9Y2D2 325 aa20.96■□□□□ 0.95
C9orf3-215ENST00000478473 TEP1Q99973 2627 aaKnown RBP20.96■□□□□ 0.95
C9orf3-215ENST00000478473 SYNGR4O95473 234 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 NUDT14O95848 222 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 C1QCP02747 245 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 PABPC4LP0CB38 370 aaKnown RBP20.95■□□□□ 0.94
C9orf3-215ENST00000478473 ZCCHC18P0CG32 403 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 CCKARP32238 428 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 CHI3L1P36222 383 aaPredicted RBP20.95■□□□□ 0.94
C9orf3-215ENST00000478473 CDKN2CP42773 168 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 NME5P56597 212 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 CARD18P57730 90 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 SIRPAP78324 504 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 SELENBP1Q13228 472 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 QPRTQ15274 297 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 ZNF239Q16600 458 aaKnown RBP20.95■□□□□ 0.94
C9orf3-215ENST00000478473 GTF2IRD2BQ6EKJ0 949 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 GTF2IRD2Q86UP8 949 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 ZNF614Q8N883 585 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 ZNF610Q8N9Z0 462 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 RNF128Q8TEB7 428 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 NRGNQ92686 78 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 ATP6V1G3Q96LB4 118 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 OR52B2Q96RD2 323 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 PRRG4Q9BZD6 226 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 TMEM185BQ9H7F4 350 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 COQ10BQ9H8M1 238 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 PLEKHF2Q9H8W4 249 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 TIGARQ9NQ88 270 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 EXOSC3Q9NQT5 275 aaKnown RBP20.95■□□□□ 0.94
C9orf3-215ENST00000478473 ITGB1BP2Q9UKP3 347 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 PROCRQ9UNN8 238 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 EMC9Q9Y3B6 208 aa20.95■□□□□ 0.94
C9orf3-215ENST00000478473 SLC22A3O75751 556 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 TGDSO95455 350 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 CSTAP01040 98 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 OPN1LWP04000 364 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 UGT2B10P36537 528 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 RNF144AP50876 292 aaPredicted RBP20.94■□□□□ 0.94
C9orf3-215ENST00000478473 ANXA11P50995 505 aaKnown RBP20.94■□□□□ 0.94
C9orf3-215ENST00000478473 MVDP53602 400 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 IST1P53990 364 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 CASP9P55211 416 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 EPGNQ6UW88 154 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 OLIG3Q7RTU3 272 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 RNF130Q86XS8 419 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 ZFP90Q8TF47 636 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 ZG16BQ96DA0 208 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 FOXC2Q99958 501 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 THUMPD3Q9BV44 507 aaKnown RBP20.94■□□□□ 0.94
C9orf3-215ENST00000478473 EDARQ9UNE0 448 aa20.94■□□□□ 0.94
C9orf3-215ENST00000478473 C9JVG2 144 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 SFTPDP35247 375 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 CPOXP36551 454 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 PLAURQ03405 335 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 LRRC74BQ6ZQY2 392 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 CMIPQ8IY22 773 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 MBD6Q96DN6 1003 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 SLC38A1Q9H2H9 487 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 LIME1Q9H400 295 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 ACER3Q9NUN7 267 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 USH1CQ9Y6N9 552 aa20.93■□□□□ 0.94
C9orf3-215ENST00000478473 C16orf97H3BN30 126 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 RFXANKO14593 260 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 UBDO15205 165 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 H6PDO95479 791 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 POU2F1P14859 743 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 CD1EP15812 388 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 PGCP20142 388 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 RPS4Y1P22090 263 aaKnown RBP20.92■□□□□ 0.94
C9orf3-215ENST00000478473 SESN3P58005 492 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 RAC3P60763 192 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 KCNJ10P78508 379 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 CHRNEQ04844 493 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 RNPS1Q15287 305 aaKnown RBP20.92■□□□□ 0.94
C9orf3-215ENST00000478473 TMEM176BQ3YBM2 270 aaPredicted RBP20.92■□□□□ 0.94
C9orf3-215ENST00000478473 NXNQ6DKJ4 435 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 ZNF621Q6ZSS3 439 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 TMEM234Q8WY98 164 aa20.92■□□□□ 0.94
C9orf3-215ENST00000478473 MARK4Q96L34 752 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms