RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 GTPBP8Q8N3Z3 284 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 PCYOX1LQ8NBM8 494 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 FAM71CQ8NEG0 241 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 OR10Q1Q8NGQ4 319 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 OR10A6Q8NH74 314 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 FBXO27Q8NI29 283 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 RP9Q8TA86 221 aaKnown RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 BBS10Q8TAM1 723 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 GPR119Q8TDV5 335 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ITLN2Q8WWU7 325 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 OIT3Q8WWZ8 545 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ZBTB8AQ96BR9 441 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CCT8L2Q96SF2 557 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 TUBA1CQ9BQE3 449 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 TTYH2Q9BSA4 534 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 MYLK2Q9H1R3 596 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 NANOGQ9H9S0 305 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 CACYBPQ9HB71 228 aaKnown RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 DNAJB12Q9NXW2 375 aaKnown RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF443Q9Y2A4 671 aaPredicted RBP9.27□□□□□ -0.93
HDAC6-222ENST00000478095 ARL2BPQ9Y2Y0 163 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 GMEB1Q9Y692 573 aa9.27□□□□□ -0.93
HDAC6-222ENST00000478095 EML6Q6ZMW3 1958 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 CLCA1A8K7I4 914 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 AHRRA9YTQ3 701 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 EIF1AYO14602 144 aaKnown RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 TOXO94900 526 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 AVPP01185 164 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 GKN3PP0CG01 181 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 PRKCAP17252 672 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 SLC6A2P23975 617 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 PSMA4P25789 261 aaKnown RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ADH7P40394 386 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 SMSP52788 366 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 SUCLG1P53597 346 aaKnown RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 CLDN15P56746 228 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 EEF1A1P68104 462 aaKnown RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 GLYR1Q49A26 553 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF311Q5JNZ3 666 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 TMEM211Q6ICI0 200 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 REEP3Q6NUK4 255 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 CMIPQ8IY22 773 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ZZZ3Q8IYH5 903 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 CLIP4Q8N3C7 705 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ATP6V1C2Q8NEY4 427 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 OR8J3Q8NGG0 315 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF563Q8TA94 476 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 PHF10Q8WUB8 498 aaKnown RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 RND1Q92730 232 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 SDCCAG3Q96C92 435 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 TMEM38AQ9H6F2 299 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 KAT8Q9H7Z6 458 aaKnown RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 BCL2L10Q9HD36 194 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 GID8Q9NWU2 228 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ADAM21Q9UKJ8 722 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 USP22Q9UPT9 525 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 RNF6Q9Y252 685 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 ANGPT4Q9Y264 503 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 GPC6Q9Y625 555 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 NUP214P35658 2090 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-222ENST00000478095 NINQ8N4C6 2090 aa9.26□□□□□ -0.93
HDAC6-222ENST00000478095 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 A0A0G2JNJ9 132 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 C7orf72A4D263 438 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 CDHR4A6H8M9 788 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 ST8SIA5O15466 376 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 SIAH2O43255 324 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 FRS3O43559 492 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 EFNA2O43921 213 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 CLDN1O95832 211 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 EPPINO95925 133 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 OPN1SWP03999 348 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PABPC4LP0CB38 370 aaKnown RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PRG2P13727 222 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PGCP20142 388 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 ME2P23368 584 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 SHC1P29353 583 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 SFTPDP35247 375 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PTGER4P35408 488 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 EIF1P41567 113 aaKnown RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 CPA2P48052 419 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 IDH2P48735 452 aaKnown RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 NUDT2P50583 147 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 SESN3P58005 492 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 LARS2Q15031 903 aaKnown RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 BCL2A1Q16548 175 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 RNF220Q5VTB9 566 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PRAMEF8Q5VWM4 474 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PRAMEF7Q5VXH5 474 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 NSUN5P2Q63ZY6 315 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 PPP4R4Q6NUP7 873 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 CHMP1BQ7LBR1 199 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 NET1Q7Z628 596 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 GGNQ86UU5 652 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 KRT73Q86Y46 540 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 LILRA2Q8N149 483 aa9.25□□□□□ -0.93
HDAC6-222ENST00000478095 ZNF808Q8N4W9 903 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-222ENST00000478095 C9orf106Q8NAJ2 232 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms