RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 MTERF4Q7Z6M4 381 aaKnown RBP17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 ATP6V1C2Q8NEY4 427 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 CEP70Q8NHQ1 597 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 ZNF775Q96BV0 537 aaPredicted RBP17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 MRGPRX4Q96LA9 322 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 SORCS2Q96PQ0 1159 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 TMEM237Q96Q45 408 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 NAPGQ99747 312 aaPredicted RBP17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 SOX7Q9BT81 388 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 TRMOQ9BU70 441 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 FKRPQ9H9S5 495 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 MYOZ1Q9NP98 299 aaPredicted RBP17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 STK38LQ9Y2H1 464 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 ATP23Q9Y6H3 246 aa17.77■□□□□ 0.44
PDLIM1-202ENST00000477757 DYSFO75923 2080 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 ARFGEF3Q5TH69 2177 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 LOC390937A0A1W2PQ73 354 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 CIB4A0PJX0 185 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 HSPA4LO95757 839 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 APOBEC3AP31941 199 aaPredicted RBP17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 SERPINB4P48594 390 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 P2RX1P51575 399 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 PHC1P78364 1004 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 TOMM34Q15785 309 aaPredicted RBP17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 FAM174BQ3ZCQ3 159 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 COX18Q8N8Q8 333 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 NUP43Q8NFH3 380 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 FAM76AQ8TAV0 307 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 PHOSPHO1Q8TCT1 267 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 ZFAND2BQ8WV99 257 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 KCNA7Q96RP8 456 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 MALT1Q9UDY8 824 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 TIMM22Q9Y584 194 aa17.76■□□□□ 0.43
PDLIM1-202ENST00000477757 A0A1W2PR80 420 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 CCDC151A5D8V7 595 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 PDPK1O15530 556 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 IGHV3-9P01782 118 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 EGR1P18146 543 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 GPC1P35052 558 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 PRKAG1P54619 331 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 LCP2Q13094 533 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 SWI5Q1ZZU3 235 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 IQCCQ4KMZ1 466 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 SLC25A53Q5H9E4 307 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 CCNJQ5T5M9 372 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 ABLIM2Q6H8Q1 611 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 SZRD1Q7Z422 152 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 GPR119Q8TDV5 335 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 ZNF764Q96H86 408 aaPredicted RBP17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 FOXN4Q96NZ1 517 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 TAS2R16Q9NYV7 291 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 EMC3Q9P0I2 261 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 CARD8Q9Y2G2 431 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 UTP11Q9Y3A2 253 aaKnown RBP17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 TRAF6Q9Y4K3 522 aa17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 POLR3HQ9Y535 204 aaPredicted RBP17.75■□□□□ 0.43
PDLIM1-202ENST00000477757 IGKV3D-15A0A087WSY6 115 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 CCT8L1PA6NM43 557 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 ETV2O00321 342 aaPredicted RBP17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 H6PDO95479 791 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 INHBAP08476 426 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 ALOX5P09917 674 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 PHBP35232 272 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 SRP14P37108 136 aaKnown RBP17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 PKNOX1P55347 436 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 GNG11P61952 73 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 CARTPTQ16568 116 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 MST1LQ2TV78 715 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 EXOSC6Q5RKV6 272 aaKnown RBP17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 C3orf33Q6P1S2 294 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 UBE2J2Q8N2K1 259 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 SEMA6DQ8NFY4 1073 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 SGMS2Q8NHU3 365 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 APH1AQ96BI3 265 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 OTUB1Q96FW1 271 aaPredicted RBP17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 BPESC1Q9GZL8 116 aa17.74■□□□□ 0.43
PDLIM1-202ENST00000477757 GABRA6Q16445 453 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 OR7E24Q6IFN5 339 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 ZCCHC12Q6PEW1 402 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 ZNF527Q8NB42 609 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 ZNF540Q8NDQ6 660 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 SPATA4Q8NEY3 305 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 ZFP28Q8NHY6 868 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 CIDECQ96AQ7 238 aaPredicted RBP17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 ZNF524Q96C55 264 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 FBXO17Q96EF6 278 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 MUS81Q96NY9 551 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 OR5B2Q96R09 309 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 BTBD2Q9BX70 525 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 BHLHE41Q9C0J9 482 aaPredicted RBP17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 IQCGQ9H095 443 aaKnown RBP17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 RAB17Q9H0T7 212 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 ASB6Q9NWX5 421 aa17.73■□□□□ 0.43
PDLIM1-202ENST00000477757 ATP6V1G2-DDX39BF2Z307 99 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 TAC1P20366 129 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 COMPP49747 757 aaPredicted RBP17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 SERPINB9P50453 376 aa17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 RNF144AP50876 292 aaPredicted RBP17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 SNRPD2P62316 118 aaKnown RBP17.72■□□□□ 0.43
PDLIM1-202ENST00000477757 POU6F2P78424 691 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms