RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ARMC12Q5T9G4 340 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ATG9BQ674R7 924 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ANGPTL5Q86XS5 388 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 CMTM8Q8IZV2 173 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 GPR137CQ8N3F9 429 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 PROKR2Q8NFJ6 384 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 WFDC5Q8TCV5 224 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 PROKR1Q8TCW9 393 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 SH3RF2Q8TEC5 729 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 HSD17B8Q92506 261 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ATF6BQ99941 703 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 PIGQQ9BRB3 760 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 ADAT1Q9BUB4 502 aaKnown RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 TUBB1Q9H4B7 451 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC25A19Q9HC21 320 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 TMEM138Q9NPI0 162 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 MIEF1Q9NQG6 463 aa11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 NFKBIL1Q9UBC1 381 aaPredicted RBP11.81□□□□□ -0.52
RTFDC1-207ENST00000477573 BPTFQ12830 3046 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 C2orf92A0A1B0GVN3 265 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF593O00488 134 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 LRRTM2O43300 516 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 OR2T1O43869 369 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 NDUFS3O75489 264 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 FABP3P05413 133 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 HNRNPA1P09651 372 aaKnown RBP eCLIP11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 TBXA2RP21731 343 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 FGF9P31371 208 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 PRKXP51817 358 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 CTBP2P56545 445 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 SOX8P57073 446 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 BCL2L1Q07817 233 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 LMAN2Q12907 356 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 UNC50Q53HI1 259 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 C22orf42Q6IC83 251 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF549Q6P9A3 640 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 ASB18Q6ZVZ8 466 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 RPS27LQ71UM5 84 aaKnown RBP11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 LDB1Q86U70 411 aaPredicted RBP11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 CFAP206Q8IYR0 622 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 MDGA1Q8NFP4 955 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 C22orf15Q8WYQ4 148 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 OR4K3Q96R72 315 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 IFT27Q9BW83 186 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 POLR2J2Q9GZM3 115 aaKnown RBP11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 ENAMQ9NRM1 1142 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 MRPS18CQ9Y3D5 142 aaKnown RBP11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 NPFFR2Q9Y5X5 522 aa11.8□□□□□ -0.52
RTFDC1-207ENST00000477573 A0A1B0GUH1 482 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 SOCS5O75159 536 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 IGSF6O95976 241 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 RHOP08100 348 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 C1GALT1C1LP0DN25 315 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 RPA2P15927 270 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 MGMTP16455 207 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 CPEP16870 476 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 FDXRP22570 491 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 RBMS1P29558 406 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 GDI1P31150 447 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 RFX3P48380 749 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 TTPAP49638 278 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 SRSF11Q05519 484 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 DDX39BQ13838 428 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 PLK5Q496M5 336 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC22A10Q63ZE4 541 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 CDC73Q6P1J9 531 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 CLEC9AQ6UXN8 241 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 APCDD1Q8J025 514 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 PHF21BQ96EK2 531 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 MRGPRX4Q96LA9 322 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 TEAD3Q99594 435 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 MYOCQ99972 504 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 THUMPD3Q9BV44 507 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 TLNRD1Q9H1K6 362 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 GSX1Q9H4S2 264 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 TUBA4BQ9H853 241 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 NTMQ9P121 344 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 MGAT4CQ9UBM8 478 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC9A8Q9Y2E8 581 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 MRPS23Q9Y3D9 190 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 HELZP42694 1942 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 ARPC5O15511 151 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 RDH16O75452 317 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 EN2P19622 333 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 PPP2R1BP30154 601 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 IDH2P48735 452 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 ANXA11P50995 505 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 PGGT1BP53609 377 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 CDKN2DP55273 166 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 GMFBP60983 142 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 LSM6P62312 80 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 HSD11B2P80365 405 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 MADCAM1Q13477 382 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 FNDC3BQ53EP0 1204 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 ATXN7L2Q5T6C5 722 aaPredicted RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 OR52W1Q6IF63 320 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC25A24Q6NUK1 477 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 UNQ6494/PRO21346Q6UXR6 183 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms