RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	ZNF628	Q5EBL2	1059 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SPANXN4	Q5MJ08	99 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CES4A	Q5XG92	561 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC22A10	Q63ZE4	541 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TMEM198	Q66K66	360 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC25A25	Q6KCM7	469 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	FAM180B	Q6P0A1	224 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IL20RB	Q6UXL0	311 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RTL4	Q6ZR62	310 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF551	Q7Z340	670 aa	Predicted RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	NUP54	Q7Z3B4	507 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	C16orf62	Q7Z3J2	963 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ARPIN	Q7Z6K5	226 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RIMKLA	Q8IXN7	391 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC34A3	Q8N130	599 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	BEST3	Q8N1M1	668 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CPSF7	Q8N684	471 aa	Known RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	KRTCAP2	Q8N6L1	136 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	APCDD1L	Q8NCL9	501 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	NFAM1	Q8NET5	270 aa	Predicted RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	C16orf52	Q8NHV5	167 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RP9	Q8TA86	221 aa	Known RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	BCAS4	Q8TDM0	211 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF721	Q8TF20	911 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	HAS2	Q92819	552 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RFK	Q969G6	155 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CIDEC	Q96AQ7	238 aa	Predicted RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ELP4	Q96EB1	424 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CLPTM1L	Q96KA5	538 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF681	Q96N22	645 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TRIB1	Q96RU8	372 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SMAD5	Q99717	465 aa	Known RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC35A5	Q9BS91	424 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	NUDT9	Q9BW91	350 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ACTRT3	Q9BYD9	372 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SEMA4C	Q9C0C4	833 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	WWTR1	Q9GZV5	400 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	HOXD1	Q9GZZ0	328 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	METTL7A	Q9H8H3	244 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	FOLH1B	Q9HBA9	442 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	EQTN	Q9NQ60	294 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SACM1L	Q9NTJ5	587 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	KLRF1	Q9NZS2	232 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CNIH4	Q9P003	139 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ANAPC2	Q9UJX6	822 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC13A4	Q9UKG4	626 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PPIE	Q9UNP9	301 aa	Known RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	B3GNT3	Q9Y2A9	372 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TP53TG5	Q9Y2B4	290 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	L3MBTL1	Q9Y468	752 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	COPG1	Q9Y678	874 aa	Known RBP	4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CACNA1A	O00555	2505 aa		4.13	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	DMD	P11532	3685 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	NCOR2	Q9Y618	2525 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	LOC100653049	A0A140TA62	436 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	WASHC1	A8K0Z3	465 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	GTPBP1	O00178	669 aa	Known RBP	4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	UPK1A	O00322	258 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF195	O14628	629 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SNX3	O60493	162 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC25A12	O75746	678 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CEACAM4	O75871	244 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	KRT34	O76011	436 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SNX4	O95219	450 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RASAL1	O95294	804 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	WDPCP	O95876	746 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IGKV3-11	P04433	115 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CT62	P0C5K7	136 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZCCHC18	P0CG32	403 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	NR2F1	P10589	423 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	UQCRB	P14927	111 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	EFNA1	P20827	205 aa	Predicted RBP	4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	DRD4	P21917	467 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	GPX3	P22352	226 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PRDX6	P30041	224 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	GABRA3	P34903	492 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	FRK	P42685	505 aa	Predicted RBP	4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RASSF2	P50749	326 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CDK9	P50750	372 aa	Known RBP	4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	DGKQ	P52824	942 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PNLIPRP2	P54317	469 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CASP6	P55212	293 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	KCNJ2	P63252	427 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	HBA1	P69905	142 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RCAN2	Q14206	197 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	LASP1	Q14847	261 aa	Known RBP	4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TOMM20	Q15388	145 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	OR1C1	Q15619	314 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	GPAT3	Q53EU6	434 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PIGG	Q5H8A4	983 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF766	Q5HY98	468 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	H3F3C	Q6NXT2	135 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CDC73	Q6P1J9	531 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IGFL3	Q6UXB1	125 aa		4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.12	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	MAVS	Q7Z434	540 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms