RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 KIAA1024LP59773 190 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 KLHL22Q53GT1 634 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 HLA-DQA1Q5Y7H0 255 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 LRFN4Q6PJG9 635 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 JAZF1Q86VZ6 243 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF527Q8NB42 609 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 GPR32P1Q8NGA4 272 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR4M1Q8NGD0 313 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR5J2Q8NH18 312 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 PEX13Q92968 403 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ISG20Q96AZ6 181 aaKnown RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 TESCQ96BS2 214 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 TM4SF18Q96CE8 201 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 YIPF6Q96EC8 236 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ELMOD3Q96FG2 381 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 OR7D2Q96RA2 312 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 NDC1Q9BTX1 674 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 BARHL1Q9BZE3 327 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 MAF1Q9H063 256 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ARL6Q9H0F7 186 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 TSPAN10Q9H1Z9 355 aaPredicted RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 MAGIXQ9H6Y5 334 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 HINT3Q9NQE9 182 aaKnown RBP4.65□□□□□ -1.67
CCDC39-204ENST00000476379 MGAT4CQ9UBM8 478 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 AP3M1Q9Y2T2 418 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 CCL27Q9Y4X3 112 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 PCDHGA2Q9Y5H1 932 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 ALPK3Q96L96 1907 aa4.65□□□□□ -1.67
CCDC39-204ENST00000476379 AGAP14A8MT82 685 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 E9PI62 339 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 IGLV3-27P01718 113 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CSF3P09919 207 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ITGAMP11215 1152 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ELK1P19419 428 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DDCP20711 480 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 BCL6P41182 706 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 MNDAP41218 407 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ARRB1P49407 418 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 STARP49675 285 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 MVDP53602 400 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SMIM11AP58511 58 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DGCR2P98153 550 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 GALK2Q01415 458 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ZNHIT3Q15649 155 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ALG10BQ5I7T1 473 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SLC6A19Q695T7 634 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 C8orf82Q6P1X6 216 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF782Q6ZMW2 699 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CD163Q86VB7 1156 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 GPR135Q8IZ08 494 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ACBD7Q8N6N7 88 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 OR52B4Q8NGK2 314 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 LILRB4Q8NHJ6 448 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ZDHHC1Q8WTX9 485 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RASD2Q96D21 266 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 LRIG1Q96JA1 1093 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DERL3Q96Q80 235 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SLC6A7Q99884 636 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 THAP7Q9BT49 309 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SFXN1Q9H9B4 322 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SLC6A20Q9NP91 592 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 C12orf4Q9NQ89 552 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 C20orf141Q9NUB4 165 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 GSKIPQ9P0R6 139 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CADP27708 2225 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 A0A1W2PR48 441 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 A0A1W2PRQ8 180 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CCSO14618 274 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 KCNAB3O43448 404 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 HCRTR2O43614 444 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 B3GALT2O43825 422 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FZD6O60353 706 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ICMTO60725 284 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 STX11O75558 287 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 HIST1H2ABP04908 130 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 M6PRP20645 277 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TRHRP34981 398 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 P2RY2P41231 377 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SLC1A3P43003 542 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 OR1D4P47884 311 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 VEGFCP49767 419 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 POU6F2P78424 691 aaPredicted RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CDK3Q00526 305 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DUSP2Q05923 314 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 DMWDQ09019 674 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 EIF2B5Q13144 721 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 CBLBQ13191 982 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ILKQ13418 452 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ADAM15Q13444 863 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 RUNX3Q13761 415 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TRAM2Q15035 370 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 TAF13Q15543 124 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 MRPL2Q5T653 305 aaKnown RBP4.64□□□□□ -1.67
CCDC39-204ENST00000476379 ARHGAP40Q5TG30 622 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 GARNL3Q5VVW2 1013 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 SAXO2Q658L1 398 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 NUDT18Q6ZVK8 323 aa4.64□□□□□ -1.67
CCDC39-204ENST00000476379 FCRLAQ7L513 359 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms