RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 MITFO75030 526 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-217ENST00000475693 GADD45GO95257 159 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 EVI2BP34910 448 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 CCR4P51679 360 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 TAS2R41P59536 307 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 ZIK1Q3SY52 487 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-217ENST00000475693 FNDC7Q5VTL7 733 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 RAB43Q86YS6 212 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 ZDHHC13Q8IUH4 622 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 NKAIN4Q8IVV8 208 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 HGDQ93099 445 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 COX4I2Q96KJ9 171 aa16.55■□□□□ 0.24
ATG4B-217ENST00000475693 MRTO4Q9UKD2 239 aaKnown RBP16.55■□□□□ 0.24
ATG4B-217ENST00000475693 OR6C70A6NIJ9 312 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 GNB5O14775 395 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 EFSO43281 561 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 TLX3O43711 291 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-217ENST00000475693 NOL3O60936 208 aaKnown RBP16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ITGA2P17301 1181 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 PRAMEF20Q5VT98 475 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ZNF773Q6PK81 442 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 KCTD8Q6ZWB6 473 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 GALNT5Q7Z7M9 940 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 P3H2Q8IVL5 708 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 OR4C15Q8NGM1 316 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 OR13F1Q8NGS4 319 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 SLC7A13Q8TCU3 470 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 DUSP19Q8WTR2 217 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 RDH12Q96NR8 316 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ZNF347Q96SE7 839 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 TRIM45Q9H8W5 580 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-217ENST00000475693 NCOR2Q9Y618 2525 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 PRRC2CQ9Y520 2896 aaKnown RBP16.54■□□□□ 0.24
ATG4B-217ENST00000475693 GTPBP1O00178 669 aaKnown RBP16.54■□□□□ 0.24
ATG4B-217ENST00000475693 MAGEB3O15480 346 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ANGPTL1O95841 491 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ITGA3P26006 1051 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 DNAJA1P31689 397 aaKnown RBP16.54■□□□□ 0.24
ATG4B-217ENST00000475693 MLF1P58340 268 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 IL1RL1Q01638 556 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ZNF117Q03924 483 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 OR1Q1Q15612 314 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 TOMM34Q15785 309 aaPredicted RBP16.54■□□□□ 0.24
ATG4B-217ENST00000475693 MDGA2Q7Z553 956 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 CYP4Z1Q86W10 505 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 CADM2Q8N3J6 435 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 TMCO5AQ8N6Q1 288 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 OR5K1Q8NHB7 308 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 GIPC3Q8TF64 312 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 NACC2Q96BF6 587 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 DCUN1D5Q9BTE7 237 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 FNDC11Q9BVV2 318 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 TBL1XR1Q9BZK7 514 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 EXPH5Q8NEV8 1989 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ACACAQ13085 2346 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 ZZEF1O43149 2961 aa16.54■□□□□ 0.24
ATG4B-217ENST00000475693 NDUFB5O43674 189 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 HS6ST1O60243 411 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SERPINA7P05543 415 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 POLR2IP36954 125 aaKnown RBP16.53■□□□□ 0.24
ATG4B-217ENST00000475693 DAPP51397 102 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 EIPR1Q53HC9 387 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 GPR107Q5VW38 600 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SHQ1Q6PI26 577 aaKnown RBP16.53■□□□□ 0.24
ATG4B-217ENST00000475693 WDR88Q6ZMY6 472 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 PLEKHM3Q6ZWE6 761 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 GDF7Q7Z4P5 450 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SLC39A7Q92504 469 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 POP5Q969H6 163 aaKnown RBP16.53■□□□□ 0.24
ATG4B-217ENST00000475693 NXPE2Q96DL1 559 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 ALPK1Q96QP1 1244 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 ACAD8Q9UKU7 415 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SLC7A7Q9UM01 511 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 B3GNT3Q9Y2A9 372 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 HCRTR2O43614 444 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SNAP29O95721 258 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 H1F0P07305 194 aaKnown RBP16.53■□□□□ 0.24
ATG4B-217ENST00000475693 GUSBP08236 651 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 FBXO45P0C2W1 286 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 UBL4AP11441 157 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 ELAVL4P26378 380 aaKnown RBP16.53■□□□□ 0.24
ATG4B-217ENST00000475693 LIMS1P48059 325 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 ZNF791Q3KP31 576 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-217ENST00000475693 PODNL1Q6PEZ8 512 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SLC5A8Q8N695 610 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 ZNF527Q8NB42 609 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SLC22A8Q8TCC7 542 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 SPACA9Q96E40 222 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-217ENST00000475693 PLEKHA8Q96JA3 519 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 PRRC1Q96M27 445 aa16.53■□□□□ 0.24
ATG4B-217ENST00000475693 ADAMDEC1O15204 470 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 SEC14L2O76054 403 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 HPRP00739 348 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 FPR1P21462 350 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 SKP2Q13309 424 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 BEST3Q8N1M1 668 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 TMEM156Q8N614 296 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 ZBTB8BQ8NAP8 495 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-217ENST00000475693 RAB2BQ8WUD1 216 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 TRUB1Q8WWH5 349 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms