RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.2
MCF2L-224ENST00000475524 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 C2orf72A6NCS6 295 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 B4DXG7 233 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 LINC01387J3KSC0 135 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 M0R3H8 397 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 CDC40O60508 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
MCF2L-224ENST00000475524 CYP7B1O75881 506 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 NTN1O95631 604 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 DPP4P27487 766 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 SLC7A1P30825 629 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 IFNA8P32881 189 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 CCR4P51679 360 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 CCNIQ14094 377 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 INPP5JQ15735 1006 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-224ENST00000475524 PLPPR5Q32ZL2 321 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 NDUFAF6Q330K2 333 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 WBP2NLQ6ICG8 309 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 ZFP1Q6P2D0 407 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 PCSK4Q6UW60 755 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 CYP4Z1Q86W10 505 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 DNAJA4Q8WW22 397 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-224ENST00000475524 RSRC1Q96IZ7 334 aaKnown RBP13.77□□□□□ -0.21
MCF2L-224ENST00000475524 JSRP1Q96MG2 331 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-224ENST00000475524 GNRHR2Q96P88 292 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 ZNF347Q96SE7 839 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 MCHR1Q99705 422 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 DENND2DQ9H6A0 471 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-224ENST00000475524 TMEM27Q9HBJ8 222 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 MED17Q9NVC6 651 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 FBXL2Q9UKC9 423 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 ACAD8Q9UKU7 415 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 HRH3Q9Y5N1 445 aa13.77□□□□□ -0.21
MCF2L-224ENST00000475524 PCNX3Q9H6A9 2034 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 NCKAP5O14513 1909 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 ATXN7O15265 892 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-224ENST00000475524 ADAM11O75078 769 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 OR5F1O95221 314 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 NUDT14O95848 222 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 FABP3P05413 133 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 GKN3PP0CG01 181 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 GP1BBP13224 206 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 PRG2P13727 222 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 ZNF24P17028 368 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 RHCEP18577 417 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 FKBP2P26885 142 aaKnown RBP13.76□□□□□ -0.21
MCF2L-224ENST00000475524 GDF1P27539 372 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 ELK4P28324 431 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 SLC1A3P43003 542 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 PPIAP62937 165 aaKnown RBP13.76□□□□□ -0.21
MCF2L-224ENST00000475524 GK3PQ14409 553 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 KPNB1Q14974 876 aaKnown RBP13.76□□□□□ -0.21
MCF2L-224ENST00000475524 QPRTQ15274 297 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 NPTX1Q15818 432 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 TMEM44Q2T9K0 475 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 NADK2Q4G0N4 442 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 IQCCQ4KMZ1 466 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 OR5M10Q6IEU7 315 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 GRINAQ7Z429 371 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 LACC1Q8IV20 430 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 GTPBP8Q8N3Z3 284 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-224ENST00000475524 TMEM251Q8N6I4 163 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 Q8NA96 180 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 OR4D11Q8NGI4 311 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 CANT1Q8WVQ1 401 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 PRRC1Q96M27 445 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 ZNF300Q96RE9 604 aaPredicted RBP13.76□□□□□ -0.21
MCF2L-224ENST00000475524 AMBRA1Q9C0C7 1298 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 ANKRD19PQ9H560 264 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 ARMC1Q9NVT9 282 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 DKKL1Q9UK85 242 aa13.76□□□□□ -0.21
MCF2L-224ENST00000475524 TRAPPC13A5PLN9 417 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 FRS3O43559 492 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 TPST2O60704 377 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 IGHG3P01860 377 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 RFPL3SP0C7P2 107 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 PRKCAP17252 672 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 HTR2AP28223 471 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 APOBEC1P41238 236 aaKnown RBP13.75□□□□□ -0.21
MCF2L-224ENST00000475524 OR1E2P47887 323 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 IDH2P48735 452 aaKnown RBP13.75□□□□□ -0.21
MCF2L-224ENST00000475524 SESN3P58005 492 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 VLDLRP98155 873 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 ULK3Q6PHR2 472 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 FAM180AQ6UWF9 173 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 ZDHHC21Q8IVQ6 265 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 OFCC1Q8IZS5 231 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 OR10Q1Q8NGQ4 319 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 ZNF563Q8TA94 476 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 VANGL1Q8TAA9 524 aaPredicted RBP13.75□□□□□ -0.21
MCF2L-224ENST00000475524 MPP4Q96JB8 637 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 SEPHS2Q99611 448 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 PIGQQ9BRB3 760 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 MFRPQ9BY79 579 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 ADAM19Q9H013 955 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 NDUFAF4Q9P032 175 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 RPS6KB2Q9UBS0 482 aa13.75□□□□□ -0.21
MCF2L-224ENST00000475524 FAM32AQ9Y421 112 aaKnown RBP13.75□□□□□ -0.21
MCF2L-224ENST00000475524 ZZEF1O43149 2961 aa13.74□□□□□ -0.21
MCF2L-224ENST00000475524 A0A0B4J2E0 115 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms