RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 OAZ3Q9UMX2 235 aa5.57□□□□□ -1.52
ECHDC1-215ENST00000475319 ADAM18Q9Y3Q7 739 aa5.57□□□□□ -1.52
ECHDC1-215ENST00000475319 KIF13BQ9NQT8 1826 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CCDC187A0A096LP49 1063 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 A0A1B0GV72 72 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 FAM240BA0A1B0GVZ2 78 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 C7orf66A4D0T2 115 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PGPEP1LA6NFU8 196 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF716A6NP11 495 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 F5H0A9 414 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 INMT-MINDY4F8WBC2 141 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SMLR1H3BR10 107 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 DFFAO00273 331 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 BHLHE40O14503 412 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ANKRD28O15084 1053 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 OGG1O15527 345 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ICOSLGO75144 302 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PRDM1O75626 825 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 RP2O75695 350 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 AQP8O94778 261 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CLIC3O95833 236 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 HPP00738 406 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 IGF2P01344 180 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SERPINE1P05121 402 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ITGA5P08648 1049 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 HOXB5P09067 269 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SBK3P0C264 359 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 TSPAN19P0C672 248 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF735P0CB33 412 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 GIMD1P0DJR0 217 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 GABRA1P14867 456 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ZNF44P15621 663 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 HOXA5P20719 270 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ACO1P21399 889 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PRKCHP24723 683 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CERS1P27544 350 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SLC6A1P30531 599 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 NAA10P41227 235 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 EVX1P49640 407 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 DNAJB13P59910 316 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 UBE2G2P60604 165 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PPP3R1P63098 170 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 EIF5AP63241 154 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CXADRP78310 365 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 TRA2AQ13595 282 aaKnown RBP eCLIP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 RAB32Q13637 225 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SF3A2Q15428 464 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SHBQ15464 509 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ISXQ2M1V0 245 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 KLHL22Q53GT1 634 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ZRANB3Q5FWF4 1079 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PCID2Q5JVF3 399 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 FNBP1LQ5T0N5 605 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 C10orf91Q5T1B1 145 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SAXO2Q658L1 398 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 GLYATQ6IB77 296 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CHST3Q7LGC8 479 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SSX7Q7RTT5 188 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PXKQ7Z7A4 578 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 FOXRED2Q8IWF2 684 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CFAP206Q8IYR0 622 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 FAM89BQ8N5H3 189 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 RTL3Q8N8U3 475 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 UBAC2Q8NBM4 344 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PXT1Q8NFP0 134 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 BPIFCQ8NFQ6 507 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 OR4C6Q8NH72 309 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 OR1S1Q8NH92 325 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 FIBINQ8TAL6 211 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 DNAJB14Q8TBM8 379 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 RNASE8Q8TDE3 154 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 HAS2Q92819 552 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CDS1Q92903 461 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 RCN3Q96D15 328 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CMBLQ96DG6 245 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 FOXN4Q96NZ1 517 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 RTP3Q9BQQ7 232 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 DDA1Q9BW61 102 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ELOVL4Q9GZR5 314 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SLITRK2Q9H156 845 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ACTL8Q9H568 366 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PNO1Q9NRX1 252 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ADARB2Q9NS39 739 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ZCCHC3Q9NUD5 404 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 FAM118AQ9NWS6 357 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 SIDT1Q9NXL6 827 aaKnown RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 PLEK2Q9NYT0 353 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ADA2Q9NZK5 511 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 MARCOQ9UEW3 520 aaPredicted RBP5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 CLCA2Q9UQC9 943 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 RNF6Q9Y252 685 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 WIF1Q9Y5W5 379 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ALG6Q9Y672 507 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 MTCH2Q9Y6C9 303 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 V9GYH0 126 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 ROBO3Q96MS0 1386 aa5.56□□□□□ -1.52
ECHDC1-215ENST00000475319 A0A087WZ62 844 aa5.55□□□□□ -1.52
ECHDC1-215ENST00000475319 A0A0G2JNJ9 132 aa5.55□□□□□ -1.52
ECHDC1-215ENST00000475319 OR2A25A4D2G3 310 aa5.55□□□□□ -1.52
ECHDC1-215ENST00000475319 PRSS29PA6NIE9 313 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms