RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 KCTD19Q17RG1 926 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FNBP1LQ5T0N5 605 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GCNT6Q5T4J0 391 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF774Q6NX45 483 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZDHHC24Q6UX98 284 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 NAPRTQ6XQN6 538 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 C15orf39Q6ZRI6 1047 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ADCK2Q7Z695 626 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 TRIM69Q86WT6 500 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 MS4A15Q8N5U1 240 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FAM47BQ8NA70 645 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GPR148Q8TDV2 347 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 NRGNQ92686 78 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FAM162AQ96A26 154 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CHP1Q99653 195 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 NKX6-2Q9C056 277 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 DHX35Q9H5Z1 703 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CARS2Q9HA77 564 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 IL17CQ9P0M4 197 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ING1Q9UK53 422 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 DKKL1Q9UK85 242 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 PKP3Q9Y446 797 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 POLR3HQ9Y535 204 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 PCDHA9Q9Y5H5 950 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ARID2Q68CP9 1835 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 A0A1B0GW15 77 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CLCA1A8K7I4 914 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 OR4F21O95013 312 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 APODP05090 189 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 NMBP08949 121 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 MATKP42679 507 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 INPP1P49441 399 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 NR0B1P51843 470 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 BTG1P62324 171 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 DYNLT1P63172 113 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CCDC157Q569K6 752 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 TREML2Q5T2D2 321 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 GPR157Q5UAW9 335 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SAXO2Q658L1 398 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 OR4F3Q6IEY1 312 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 Q6ZPB1 254 aaPredicted RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 RBPMS2Q6ZRY4 209 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SPRED2Q7Z698 418 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 PGAM5Q96HS1 289 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ERGIC2Q96RQ1 377 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ORAI3Q9BRQ5 295 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 FEM1AQ9BSK4 669 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 BCO1Q9HAY6 547 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CATSPERZQ9NTU4 200 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 DZANK1Q9NVP4 752 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 MIOSQ9NXC5 875 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 PLA2G3Q9NZ20 509 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 CRIM1Q9NZV1 1036 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 SLC17A6Q9P2U8 582 aa4.52□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF346Q9UL40 294 aaKnown RBP4.52□□□□□ -1.69
NPHP3-206ENST00000474871 HELZP42694 1942 aaKnown RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 A0A087WZ62 844 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 MFSD11O43934 449 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 MMP23AO75900 390 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 PCCBP05166 539 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 SELEP16581 610 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 S1PR1P21453 382 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 MAGEA2P43356 314 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 ITGA1P56199 1179 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 CDC42P60953 191 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 SSBP2P81877 361 aaPredicted RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 ID2Q02363 134 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 FPGSQ05932 587 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 SF3A2Q15428 464 aaKnown RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 ADPRMQ3LIE5 342 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 DEFB128Q7Z7B8 93 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM25Q86YD3 366 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 CPNE8Q86YQ8 564 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 ZDHHC21Q8IVQ6 265 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 LRRC56Q8IYG6 542 aaPredicted RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 SPAG16Q8N0X2 631 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF664Q8N3J9 261 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 COLGALT1Q8NBJ5 622 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 OR1S1Q8NH92 325 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 SPATA22Q8NHS9 363 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 BRIX1Q8TDN6 353 aaKnown RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 TFAP2CQ92754 450 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 C16orf58Q96GQ5 468 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 PRRC1Q96M27 445 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 FIZ1Q96SL8 496 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 MTERF1Q99551 399 aaKnown RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 EFCAB1Q9HAE3 211 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 EXOSC3Q9NQT5 275 aaKnown RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 MRPL17Q9NRX2 175 aaKnown RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 RAD18Q9NS91 495 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 OPTCQ9UBM4 332 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 PRSS37A4D1T9 235 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 PRR19A6NJB7 356 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 C9J4A7 227 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 EMC8O43402 210 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 ACRP10323 421 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 ITPKAP23677 461 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 BRS3P32247 399 aa4.51□□□□□ -1.69
NPHP3-206ENST00000474871 CSTF1Q05048 431 aaKnown RBP4.51□□□□□ -1.69
NPHP3-206ENST00000474871 TWF1Q12792 350 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms