RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 CLEC1AQ8NC01 280 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 PEX11GQ96HA9 241 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SCLYQ96I15 445 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 OR1F2PQ96R84 312 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 STACQ99469 402 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ACBD6Q9BR61 282 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SGPP1Q9BX95 441 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 TMEM39BQ9GZU3 492 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 WNT5BQ9H1J7 359 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 RHBGQ9H310 441 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 DPEP2Q9H4A9 486 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 METTL17Q9H7H0 456 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 SEC61A2Q9H9S3 476 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 SPHK1Q9NYA1 384 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 FLRT1Q9NZU1 646 aa3.79□□□□□ -1.8
USP16-205ENST00000474835 ZNF282Q9UDV7 671 aaPredicted RBP3.79□□□□□ -1.8
USP16-205ENST00000474835 F5H423 210 aaPredicted RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 F8W810 466 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SYT5O00445 386 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 LDB3O75112 727 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 MYCLP12524 364 aaPredicted RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 ACP5P13686 325 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ETFAP13804 333 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 FPR3P25089 353 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 RAD52P43351 418 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SUCLG1P53597 346 aaKnown RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 VSX2P58304 361 aaPredicted RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 RPL38P63173 70 aaKnown RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 QRFPP83859 136 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 CRHR2Q13324 411 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 HTR4Q13639 388 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SHHQ15465 462 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 TMEM44Q2T9K0 475 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 KLHL12Q53G59 568 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SGO1Q5FBB7 561 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ATAT1Q5SQI0 421 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 OR2G6Q5TZ20 316 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 MRNIPQ6NTE8 343 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 PWWP2BQ6NUJ5 590 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 NIPAL3Q6P499 406 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 IL27RAQ6UWB1 636 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 NPAS3Q8IXF0 933 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ACOT4Q8N9L9 421 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 OR6T1Q8NGN1 323 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 PXYLP1Q8TE99 480 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 MVB12AQ96EY5 273 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ZNF558Q96NG5 402 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 APOL5Q9BWW9 433 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 WDCPQ9H6R7 721 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 WDR26Q9H7D7 661 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 CCSER2Q9H7U1 834 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ISG20L2Q9H9L3 353 aaKnown RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 TAAR2Q9P1P5 351 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 FZD4Q9ULV1 537 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 UBQLN1Q9UMX0 589 aaKnown RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 ORC6Q9Y5N6 252 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 PTPRBP23467 1997 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 TMEM238LA0A1B0GVL6 79 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 FAM227AF5H4B4 570 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 PEX10O60683 326 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SLC25A27O95847 323 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 CTSHP09668 335 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 FOLR1P15328 257 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 PSMB1P20618 241 aaKnown RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 LAP3P28838 519 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 LCN1P31025 176 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 TTPAP49638 278 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 HNMTP50135 292 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 PNLIPRP1P54315 467 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 CDC42P60953 191 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SPEM2Q0P670 501 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 TSPAN31Q12999 210 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 GPNMBQ14956 572 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ISXQ2M1V0 245 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SCYL2Q6P3W7 929 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 CRIP3Q6Q6R5 217 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 IFNEQ86WN2 208 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ZBTB8OSQ8IWT0 167 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 DNAAF3Q8N9W5 541 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 AQP11Q8NBQ7 271 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 LINGO1Q96FE5 620 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ERMAPQ96PL5 475 aaPredicted RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 SERINC2Q96SA4 455 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 NRIP2Q9BQI9 281 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 OCSTAMPQ9BR26 566 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 GGACTQ9BVM4 153 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 BTBD1Q9H0C5 482 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 MED28Q9H204 178 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 OPA3Q9H6K4 179 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SLC2A4RGQ9NR83 387 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 SLC17A5Q9NRA2 495 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 MMP26Q9NRE1 261 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.78□□□□□ -1.8
USP16-205ENST00000474835 SLC9B1P1A6NJY1 282 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 PRR32B1ATL7 298 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 E9PI62 339 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 GPR31O00270 319 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 WNT10BO00744 389 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 RASGRP1O95267 797 aa3.78□□□□□ -1.8
USP16-205ENST00000474835 GLAP06280 429 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms