RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TMEM178AQ8NBL3 297 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 PSD4Q8NDX1 1056 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 OR4D11Q8NGI4 311 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 PAQR8Q8TEZ7 354 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 APOBEC4Q8WW27 367 aaKnown RBP9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 ZNF184Q99676 751 aaPredicted RBP9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 TEX12Q9BXU0 123 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 COQ10BQ9H8M1 238 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 CPNE5Q9HCH3 593 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 GALNT9Q9HCQ5 603 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 SERINC1Q9NRX5 453 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 DKK4Q9UBT3 224 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 CNOT11Q9UKZ1 510 aaKnown RBP9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 A4GNTQ9UNA3 340 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 MGAT4BQ9UQ53 548 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM5Q9Y2B1 443 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 POFUT2Q9Y2G5 429 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 KLF13Q9Y2Y9 288 aaPredicted RBP9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 MED31Q9Y3C7 131 aa9.39□□□□□ -0.91
PRPF38A-202ENST00000474048 A0A1B0GWA3 101 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 OR5H15A6NDH6 313 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 ARRDC5A6NEK1 342 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 TMEM229AB2RXF0 380 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 MKRN2OSH3BPM6 223 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 GNB5O14775 395 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 TLX3O43711 291 aaPredicted RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 PRSS23O95084 383 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 EPPINO95925 133 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 PRG2P13727 222 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 GTF2E2P29084 291 aaKnown RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 RBM34P42696 430 aaKnown RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 SLC1A3P43003 542 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 POLR2HP52434 150 aaKnown RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 ZNF136P52737 540 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 IST1P53990 364 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 PLGLB1Q02325 96 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 SRSF6Q13247 344 aaKnown RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 OR1C1Q15619 314 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 NPTX1Q15818 432 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 FNDC7Q5VTL7 733 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 OR5M10Q6IEU7 315 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 PPP4R4Q6NUP7 873 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 POMZP3Q6PJE2 187 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 LYPD8Q6UX82 237 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 GDF7Q7Z4P5 450 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 ZNF605Q86T29 641 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 PLCZ1Q86YW0 608 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 APLFQ8IW19 511 aaPredicted RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 SPACA3Q8IXA5 215 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 C10orf53Q8N6V4 93 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 LSMEM1Q8N8F7 131 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 AQP11Q8NBQ7 271 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 FAM71CQ8NEG0 241 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 OR4K5Q8NGD3 323 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 ACOT11Q8WXI4 607 aaPredicted RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 ST8SIA1Q92185 356 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 RDH12Q96NR8 316 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 FAM173AQ9BQD7 235 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 ANGPTL4Q9BY76 406 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 GABARAPL1Q9H0R8 117 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 DSN1Q9H410 356 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 PAPOLBQ9NRJ5 636 aaKnown RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 SMPD3Q9NY59 655 aaPredicted RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 ACAD8Q9UKU7 415 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 VDAC3Q9Y277 283 aa9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 CHCHD2Q9Y6H1 151 aaPredicted RBP9.38□□□□□ -0.91
PRPF38A-202ENST00000474048 CPAMD8Q8IZJ3 1885 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 A0A087WZY1 265 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 A0A0B4J2E0 115 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 TRBV4-1A0A0J9YWV2 114 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 A0A1B0GX12 115 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ANKRD33BA6NCL7 494 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 H0YJX3 145 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 KLRC4-KLRK1H3BQV0 150 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ACOT7O00154 380 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 KPNA4O00629 521 aaPredicted RBP9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 SOCS2O14508 198 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 MAN1A2O60476 641 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ZNF354AO60765 605 aaPredicted RBP9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 WDPCPO95876 746 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 F10P00742 488 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ADAP00813 363 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 CCL3P10147 92 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 GSTM3P21266 225 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 CNR1P21554 472 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 HTR2AP28223 471 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 EIF2S3P41091 472 aaKnown RBP9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ACAA2P42765 397 aaKnown RBP9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 ST13P50502 369 aaKnown RBP9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 SOX8P57073 446 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 MERTKQ12866 999 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 TUBA3CQ13748 450 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 LAPTM4AQ15012 233 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 QPRTQ15274 297 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 BICRALQ6AI39 1079 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 TUBA3EQ6PEY2 450 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 PODNL1Q6PEZ8 512 aa9.37□□□□□ -0.91
PRPF38A-202ENST00000474048 CBLN3Q6UW01 205 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms