RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PPP1R3AQ16821 1122 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 KRTAP27-1Q3LI81 207 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 KRTAP24-1Q3LI83 254 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 RFWD3Q6PCD5 774 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 KCNIP4Q6PIL6 250 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 STAC2Q6ZMT1 411 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 STXBP4Q6ZWJ1 553 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ZNF329Q86UD4 541 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ITPRIPQ8IWB1 547 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 SLC22A18ASQ8N1D0 253 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 CSNK1G2-AS1Q8NCQ2 148 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 TRPV1Q8NER1 839 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 FAM3CQ92520 227 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 NTNG2Q96CW9 530 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ZBED6CLQ96FA7 236 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 C12orf66Q96MD2 445 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 OR5B2Q96R09 309 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 SLC6A7Q99884 636 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 TMEM121Q9BTD3 319 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 PARD6BQ9BYG5 372 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ZBP1Q9H171 429 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 OPN3Q9H1Y3 402 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 SGK2Q9HBY8 427 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 DDX19AQ9NUU7 478 aaKnown RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 NUDT15Q9NV35 164 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 ASIC3Q9UHC3 531 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 GGA2Q9UJY4 613 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 PRDM15P57071 1507 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-212ENST00000473961 DAPK1P53355 1430 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 FRMPD4Q14CM0 1322 aa3.42□□□□□ -1.86
BRCA1-212ENST00000473961 MYOM2P54296 1465 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 GRIN2BQ13224 1484 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 DNMT1P26358 1616 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 ESYT2A0FGR8 921 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 GOLGA6L10A6NI86 522 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 GOLGA8SH3BPF8 625 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 SHOX2O60902 331 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 WBP4O75554 376 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 B3GAT3O94766 335 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 PNMTP11086 282 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 CCDC130P13994 396 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 IMPDH1P20839 514 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 SERPINA2P20848 420 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 LAP3P28838 519 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 CDH5P33151 784 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 POU3F4P49335 361 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 FNTAP49354 379 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 DHPSP49366 369 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 PAX8Q06710 450 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 IFFO1Q0D2I5 559 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 RAB40BQ12829 278 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 LTB4RQ15722 352 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 NDUFA9Q16795 377 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 IMMTQ16891 758 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 C17orf58Q2M2W7 97 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 PHYHD1Q5SRE7 291 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 HHATQ5VTY9 493 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 VSTM4Q8IW00 320 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 MCOLN2Q8IZK6 566 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 ABHD12Q8N2K0 398 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 UBE2J2Q8N2K1 259 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 OR56B2PQ8NGI1 322 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 OR4D5Q8NGN0 318 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 OR4Q3Q8NH05 313 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 VN1R17PQ8TDU5 208 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 TRUB1Q8WWH5 349 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 FBXO32Q969P5 355 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 TMEM80Q96HE8 168 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 CNDP1Q96KN2 507 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 AMDHD1Q96NU7 426 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 NPAS2Q99743 824 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 RBM4BQ9BQ04 359 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 HCAR1Q9BXC0 346 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 TRIM15Q9C019 465 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 IQCGQ9H095 443 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 NAT10Q9H0A0 1025 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 GLT8D2Q9H1C3 349 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 VPS33BQ9H267 617 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 ZNF385DQ9H6B1 395 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 VPS37BQ9H9H4 285 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 SEC14L3Q9UDX4 400 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 PTBP2Q9UKA9 531 aaKnown RBP3.41□□□□□ -1.86
BRCA1-212ENST00000473961 TTC21BQ7Z4L5 1316 aa3.41□□□□□ -1.86
BRCA1-212ENST00000473961 FER1L5A0AVI2 2057 aa3.4□□□□□ -1.86
BRCA1-212ENST00000473961 PNPLA6Q8IY17 1366 aa3.4□□□□□ -1.86
BRCA1-212ENST00000473961 MAP3K5Q99683 1374 aa3.4□□□□□ -1.86
BRCA1-212ENST00000473961 ABCA10Q8WWZ4 1543 aa3.4□□□□□ -1.86
BRCA1-212ENST00000473961 ITSN2Q9NZM3 1697 aa3.4□□□□□ -1.86
BRCA1-212ENST00000473961 GOLGA6L7A0A1B0GV03 622 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ERICH2A1L162 156 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 XKRY2A2RUG3 117 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CTAGE15A4D2H0 777 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 FAM47DPA6NHR8 397 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ZSCAN5BA6NJL1 495 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 RPL37AP8A6NKH3 93 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 EFCAB7A8K855 629 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 B4DXG7 233 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 F5H6K3 240 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 G3V3Y1 287 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 LIN7AO14910 233 aaPredicted RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms