RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GKN1Q9NS71 199 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 IARS2Q9NSE4 1012 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ABCC13Q9NSE7 274 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TREX1Q9NSU2 369 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RBM22Q9NW64 420 aaKnown RBP eCLIP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CLIC5Q9NZA1 410 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 TMEM216Q9P0N5 145 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF581Q9P0T4 197 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 SENP1Q9P0U3 644 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 UXTQ9UBK9 157 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 LHX3Q9UBR4 397 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MARCOQ9UEW3 520 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OR12D3Q9UGF7 316 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 GGA2Q9UJY4 613 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CLEC4EQ9ULY5 219 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CCL26Q9Y258 94 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 PLLPQ9Y342 182 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 NAALAD2Q9Y3Q0 740 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 OR51B4Q9Y5P0 310 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MAD1L1Q9Y6D9 718 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ZFP37Q9Y6Q3 630 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 RPS6KL1Q9Y6S9 549 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 HRNRQ86YZ3 2850 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 MAP1AP78559 2803 aaPredicted RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 CENPEQ02224 2701 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 FLNCQ14315 2725 aa1.26□□□□□ -2.21
CCDC39-203ENST00000473854 ASH1LQ9NR48 2969 aaKnown RBP1.26□□□□□ -2.21
CCDC39-203ENST00000473854 INTS1Q8N201 2190 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CFAP46Q8IYW2 2715 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZFHX2Q9C0A1 2572 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZFYVE26Q68DK2 2539 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PIEZO1Q92508 2521 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CRYBG3Q68DQ2 2970 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TPRP12270 2363 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SPTBN1Q01082 2364 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LRBAP50851 2863 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PTPRQQ9UMZ3 2332 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LOC102723996A0A087X1L8 192 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 A0A0G2JND7 137 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LOC285095A0A1B0GVY8 99 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FEZF1A0PJY2 475 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC162PA2VCL2 907 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 KRT87PA6NCN2 255 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 EPOPA6NHQ4 379 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SDR42E2A6NKP2 422 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 A8MT66 165 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 F5H5T6 163 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 G3V2L1 256 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 H3BMM5 538 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 K7ERQ8 282 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 UBXN8O00124 270 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SDHDO14521 159 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CCL16O15467 120 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TEX28O15482 410 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ADAM20O43506 726 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TIMM44O43615 452 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ZBTB14O43829 449 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NIPSNAP2O75323 286 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TSPAN9O75954 239 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LUC7L3O95232 432 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ATP6V1G2O95670 118 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TSPAN12O95859 305 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GOT2P00505 430 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TIMP1P01033 207 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SLC4A1P02730 911 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 MT-ND3P03897 115 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINE1P05121 402 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FGF1P05230 155 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 C2P06681 752 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RPS17P08708 135 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SNRPAP09012 282 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GSTA2P09210 222 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ALPIP09923 528 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 MYL2P10916 166 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 MYOGP15173 224 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 NQO1P15559 274 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 EPCAMP16422 314 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DESP17661 470 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 TSPAN8P19075 237 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CDH3P22223 829 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 FCARP24071 287 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 DNASE1P24855 282 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CCNCP24863 283 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PSMA3P25788 255 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GABRR2P28476 465 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 ALDH3A1P30838 453 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 GABRA5P31644 462 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 STIP1P31948 543 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 OR1D2P34982 312 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 RFC2P35250 354 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 EIF2DP41214 584 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CASP2P42575 452 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 MAGEA9P43362 315 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CD151P48509 253 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 STK19P49842 368 aaPredicted RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINB9P50453 376 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINH1P50454 418 aaKnown RBP1.25□□□□□ -2.21
CCDC39-203ENST00000473854 CLCN4P51793 760 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 LBX1P52954 281 aa1.25□□□□□ -2.21
CCDC39-203ENST00000473854 PLK1P53350 603 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms