RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 MNAT1P51948 309 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 PCBP3P57721 371 aaKnown RBP18.79■□□□□ 0.6
TOP3A-204ENST00000472959 QPRTQ15274 297 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 SLC25A53Q5H9E4 307 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 DCST1Q5T197 706 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 SLC15A3Q8IY34 581 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ULK2Q8IYT8 1036 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 BHLHE22Q8NFJ8 381 aaPredicted RBP18.79■□□□□ 0.6
TOP3A-204ENST00000472959 OR5M1Q8NGP8 315 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 SLC35B4Q969S0 331 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF583Q96ND8 569 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 KLHDC3Q9BQ90 382 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 PIF1Q9H611 641 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ARL8BQ9NVJ2 186 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ALKBH4Q9NXW9 302 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ERRFI1Q9UJM3 462 aaPredicted RBP18.79■□□□□ 0.6
TOP3A-204ENST00000472959 CAMK2AQ9UQM7 478 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF337Q9Y3M9 751 aa18.79■□□□□ 0.6
TOP3A-204ENST00000472959 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 CFAP73A6NFT4 308 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 FAAHO00519 579 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 SEMA7AO75326 666 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 AGFG2O95081 481 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 NTN1O95631 604 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 PRKCAP17252 672 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 PSMA4P25789 261 aaKnown RBP18.78■□□□□ 0.6
TOP3A-204ENST00000472959 ELK4P28324 431 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 AQP1P29972 269 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 STARP49675 285 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 CLDN18P56856 261 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 PLAURQ03405 335 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 VEZF1Q14119 521 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 TOMM34Q15785 309 aaPredicted RBP18.78■□□□□ 0.6
TOP3A-204ENST00000472959 TMEM211Q6ICI0 200 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 DHRS4L2Q6PKH6 230 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 PATL1Q86TB9 770 aaKnown RBP18.78■□□□□ 0.6
TOP3A-204ENST00000472959 POC1BQ8TC44 478 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 ZPLD1Q8TCW7 415 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 PHF10Q8WUB8 498 aaKnown RBP18.78■□□□□ 0.6
TOP3A-204ENST00000472959 RNF145Q96MT1 663 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 RLIMQ9NVW2 624 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 CMTM6Q9NX76 183 aa18.78■□□□□ 0.6
TOP3A-204ENST00000472959 FAM220BPB1ANY3 271 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 RYKP34925 604 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 DLX5P56178 289 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 EEFSECP57772 596 aaKnown RBP18.77■□□□□ 0.6
TOP3A-204ENST00000472959 PSME3P61289 254 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 RAC1P63000 192 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 FOXF1Q12946 379 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 C1orf185Q5T7R7 199 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 C3P1Q6ZMU1 363 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 ZNF550Q7Z398 422 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 ARMC8Q8IUR7 673 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 CLIP4Q8N3C7 705 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 MEIOBQ8N635 442 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 OR2T12Q8NG77 320 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 FBXO27Q8NI29 283 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 DMRTA2Q96SC8 542 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 ACER3Q9NUN7 267 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 CHST2Q9Y4C5 530 aa18.77■□□□□ 0.6
TOP3A-204ENST00000472959 GTF3C1Q12789 2109 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 CCT8L1PA6NM43 557 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 SHISA8B8ZZ34 492 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 H0Y3Z8 333 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 H3BML4 177 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 M0QX08 132 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 MFN2O95140 757 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 ME2P23368 584 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 CPA2P48052 419 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 SLC7A2P52569 658 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 SESN3P58005 492 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 SRSF1Q07955 248 aaKnown RBP eCLIP18.76■□□□□ 0.59
TOP3A-204ENST00000472959 EPS8Q12929 822 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 B3GNT6Q6ZMB0 384 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 CCDC80Q76M96 950 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 ZNF563Q8TA94 476 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 NSL1Q96IY1 281 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 PINK1Q9BXM7 581 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 EVA1AQ9H8M9 152 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 SPAG4Q9NPE6 437 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 NDE1Q9NXR1 346 aa18.76■□□□□ 0.59
TOP3A-204ENST00000472959 NME4O00746 187 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 ADAM11O75078 769 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 GCM2O75603 506 aaPredicted RBP18.75■□□□□ 0.59
TOP3A-204ENST00000472959 GP1BBP13224 206 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 HTR3AP46098 478 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 SRYQ05066 204 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 LIPEQ05469 1076 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 ACSF3Q4G176 576 aaPredicted RBP18.75■□□□□ 0.59
TOP3A-204ENST00000472959 RTL6Q6ICC9 239 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 ZNF524Q96C55 264 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 NPAS1Q99742 590 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 KLHL28Q9NXS3 571 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 ABCD2Q9UBJ2 740 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 SLC13A4Q9UKG4 626 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 FAM215AQ9Y5M1 114 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 HIVEP3Q5T1R4 2406 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 RELNP78509 3460 aa18.75■□□□□ 0.59
TOP3A-204ENST00000472959 ELOVL7A1L3X0 281 aa18.74■□□□□ 0.59
TOP3A-204ENST00000472959 WIPF3A6NGB9 483 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms