RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ZNF611Q8N823 705 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 OR5D16Q8NGK9 328 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 IGFBPL1Q8WX77 278 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 TMEM204Q9BSN7 226 aa17.59■□□□□ 0.41
COL9A3-210ENST00000472880 NSD1Q96L73 2696 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-210ENST00000472880 ABCA2Q9BZC7 2435 aa17.58■□□□□ 0.41
COL9A3-210ENST00000472880 NPIPB9F8W1W9 429 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF264O43296 627 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 GCM2O75603 506 aaPredicted RBP17.58■□□□□ 0.4
COL9A3-210ENST00000472880 CNOT4O95628 575 aaKnown RBP17.58■□□□□ 0.4
COL9A3-210ENST00000472880 BPGMP07738 259 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 G6PDP11413 515 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 RPS26P62854 115 aaKnown RBP17.58■□□□□ 0.4
COL9A3-210ENST00000472880 HBA1P69905 142 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 CBFBQ13951 182 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 QPRTQ15274 297 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 PGS1Q32NB8 556 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 PDZK1Q5T2W1 519 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 SLC43A2Q8N370 569 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 OR5W2Q8NH69 310 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 AKAP1Q92667 903 aaKnown RBP eCLIP17.58■□□□□ 0.4
COL9A3-210ENST00000472880 ARL8AQ96BM9 186 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 NGBQ9NPG2 151 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 NOP53Q9NZM5 478 aaKnown RBP17.58■□□□□ 0.4
COL9A3-210ENST00000472880 KLHL9Q9P2J3 617 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 RNF115Q9Y4L5 304 aa17.58■□□□□ 0.4
COL9A3-210ENST00000472880 DUXAA6NLW8 204 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 EIF4E2O60573 245 aaKnown RBP17.57■□□□□ 0.4
COL9A3-210ENST00000472880 NTN1O95631 604 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 AK1P00568 194 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 YES1P07947 543 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 PAX1P15863 534 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 ATP5J2P56134 94 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 TSC22D1Q15714 1073 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 SLC25A53Q5H9E4 307 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 SFRP5Q5T4F7 317 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 C3orf33Q6P1S2 294 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 KISS1RQ969F8 398 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-210ENST00000472880 SLC35G5Q96KT7 338 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 SDF2Q99470 211 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 TMEM109Q9BVC6 243 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 NMUR2Q9GZQ4 415 aa17.57■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF701Q9NV72 531 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-210ENST00000472880 IGHV3-15A0A0B4J1V0 119 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 RNF103-CHMP3A0A140T963 221 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 A0A1W2PNR3 127 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 SERINC4A6NH21 518 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 CLOCKO15516 846 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 CYP7B1O75881 506 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 MATN1P21941 496 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 CLDN8P56748 225 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 C21orf58P58505 322 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 RAC3P60763 192 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 RPS4XP62701 263 aaKnown RBP17.56■□□□□ 0.4
COL9A3-210ENST00000472880 CAPRIN1Q14444 709 aaKnown RBP17.56■□□□□ 0.4
COL9A3-210ENST00000472880 GPR68Q15743 365 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 CLECL1Q8IZS7 167 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF619Q8N2I2 560 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 RAB3IL1Q8TBN0 382 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 POTEKPQ9BYX7 375 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 ESRP2Q9H6T0 727 aaKnown RBP17.56■□□□□ 0.4
COL9A3-210ENST00000472880 ASIC5Q9NY37 505 aa17.56■□□□□ 0.4
COL9A3-210ENST00000472880 STX11O75558 287 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 ADAP00813 363 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 CD3EP07766 207 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 CREB1P16220 341 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 ENPP1P22413 925 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 PCSK6P29122 969 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 EMX2Q04743 252 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 SKP2Q13309 424 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 P2RY6Q15077 328 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 TAB1Q15750 504 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 PDCD2Q16342 344 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-210ENST00000472880 TIGD2Q4W5G0 525 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 OR4F3Q6IEY1 312 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 C16orf62Q7Z3J2 963 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 C6orf120Q7Z4R8 191 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 NUDCD3Q8IVD9 361 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 HSD17B8Q92506 261 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 FBXW5Q969U6 566 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 ZIM3Q96PE6 472 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 OR5B2Q96R09 309 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 USB1Q9BQ65 265 aaKnown RBP17.55■□□□□ 0.4
COL9A3-210ENST00000472880 PSD2Q9BQI7 771 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 THUMPD3Q9BV44 507 aaKnown RBP17.55■□□□□ 0.4
COL9A3-210ENST00000472880 SERHL2Q9H4I8 314 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 BCO1Q9HAY6 547 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 PCDHGB4Q9UN71 923 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 LAMP3Q9UQV4 416 aa17.55■□□□□ 0.4
COL9A3-210ENST00000472880 ETV2O00321 342 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-210ENST00000472880 RNASET2O00584 256 aaKnown RBP17.54■□□□□ 0.4
COL9A3-210ENST00000472880 TYROBPO43914 113 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 CSTAP01040 98 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 PPP2R2BQ00005 443 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 ITGADQ13349 1161 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 ZNF141Q15928 474 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 SMU1Q2TAY7 513 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 ARHGAP11BQ3KRB8 267 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 NCMAPQ5T1S8 102 aa17.54■□□□□ 0.4
COL9A3-210ENST00000472880 ADAM5Q6NVV9 412 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms