RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 TRIP10Q15642 601 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 COL28A1Q2UY09 1125 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 SLC25A53Q5H9E4 307 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 LINC00114Q6XXX2 140 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 LRRC69Q6ZNQ3 347 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 LINC00696Q6ZRV3 163 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 GDF7Q7Z4P5 450 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 TMEM179BQ7Z7N9 219 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 HIPK1Q86Z02 1210 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 PACRGLQ8N7B6 248 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 CATSPER1Q8NEC5 780 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 OR2M3Q8NG83 312 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 DNAJA4Q8WW22 397 aaPredicted RBP17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 ST8SIA1Q92185 356 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 SCMH1Q96GD3 660 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 SLC41A3Q96GZ6 507 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 MPP4Q96JB8 637 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 SIGLEC12Q96PQ1 595 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 PRSS27Q9BQR3 290 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 FNDC11Q9BVV2 318 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 PRR14Q9BWN1 585 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 SEMA6AQ9H2E6 1030 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 PPP4R1LQ9P1A2 415 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 OAZ3Q9UMX2 235 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 NTNG1Q9Y2I2 539 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 PCDHGB7Q9Y5F8 929 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 FRYQ5TBA9 3013 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 CNTRLQ7Z7A1 2325 aa17.7■□□□□ 0.42
CHMP2B-204ENST00000472024 ANKRD11Q6UB99 2663 aaPredicted RBP17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 A6NL46 340 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 CPSF4LA6NMK7 179 aaKnown RBP17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 C1QTNF9BB2RNN3 333 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 GNGT2O14610 69 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 CHP2O43745 196 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 SLC25A12O75746 678 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 GADD45GO95257 159 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 NTN1O95631 604 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 C1QTNF9P0C862 333 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 CNR1P21554 472 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 PEX2P28328 305 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 SLC1A3P43003 542 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 PTDSS1P48651 473 aaKnown RBP17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 IST1P53990 364 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 CDH12P55289 794 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 COPZ1P61923 177 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 OC90Q02509 493 aaPredicted RBP17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 GANABQ14697 944 aaKnown RBP17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 TIGD3Q6B0B8 471 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 ZNF770Q6IQ21 691 aaPredicted RBP17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 ULK3Q6PHR2 472 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 PLCZ1Q86YW0 608 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 ZDHHC13Q8IUH4 622 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 LINC00471Q8N535 108 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 SLC7A13Q8TCU3 470 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 SLC38A4Q969I6 547 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 C3orf49Q96BT1 292 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 ZNF524Q96C55 264 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 KLHDC3Q9BQ90 382 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 C9orf16Q9BUW7 83 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 USE1Q9NZ43 259 aa17.69■□□□□ 0.42
CHMP2B-204ENST00000472024 C7orf72A4D263 438 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 NME2P1O60361 137 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 CDC40O60508 579 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 ZNF26P17031 533 aaPredicted RBP17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 NME2P22392 152 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 RBM34P42696 430 aaKnown RBP17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 MICAQ29983 383 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 EXOC3L2Q2M3D2 409 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 PRAMEF20Q5VT98 475 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 SPINK14Q6IE38 97 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 PPP4R4Q6NUP7 873 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 ATG4DQ86TL0 474 aaPredicted RBP17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 PACS2Q86VP3 889 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 KDF1Q8NAX2 398 aaPredicted RBP17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 SH3YL1Q96HL8 342 aaPredicted RBP17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 ALPK1Q96QP1 1244 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 DEPPQ9NTK1 212 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 ANKRD10Q9NXR5 420 aa17.68■□□□□ 0.42
CHMP2B-204ENST00000472024 A0A087WZY1 265 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 TRBV4-1A0A0J9YWV2 114 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 SH3PXD2BA1X283 911 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 LRRC3CA6NJW4 275 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 G3V2T6 193 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 H0YJX3 145 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 E2F6O75461 281 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 RASAL1O95294 804 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 HPRP00739 348 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 IGF2P01344 180 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 ITGB2P05107 769 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 IDH2P48735 452 aaKnown RBP17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 TNFSF10P50591 281 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 SESN3P58005 492 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 PPP2R2BQ00005 443 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 FOXO1Q12778 655 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 RAPSNQ13702 412 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 HYAL4Q2M3T9 481 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 SLC25A25Q6KCM7 469 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 FAHD1Q6P587 224 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 BORAQ6PGQ7 559 aa17.67■□□□□ 0.42
CHMP2B-204ENST00000472024 TMCO5AQ8N6Q1 288 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms