RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 KLHL13Q9P2N7 655 aa20.09■□□□□ 0.81
C9orf3-213ENST00000471978 ROS1P08922 2347 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 RNF103-CHMP3A0A140T963 221 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 SERINC4A6NH21 518 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 RNASET2O00584 256 aaKnown RBP20.08■□□□□ 0.81
C9orf3-213ENST00000471978 STX11O75558 287 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 PRKD3O94806 890 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 NTN1O95631 604 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 AK1P00568 194 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 PSMB1P20618 241 aaKnown RBP20.08■□□□□ 0.81
C9orf3-213ENST00000471978 NR1H2P55055 460 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 SELENBP1Q13228 472 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 QPRTQ15274 297 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 SLC25A53Q5H9E4 307 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 NUFIP2Q7Z417 695 aaKnown RBP20.08■□□□□ 0.81
C9orf3-213ENST00000471978 OR8J2Q8NGG1 315 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 OR4A15Q8NGL6 344 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 ARSGQ96EG1 525 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 PERPQ96FX8 193 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 DPY30Q9C005 99 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 C20orf27Q9GZN8 174 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 COQ10BQ9H8M1 238 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 PCDHGB4Q9UN71 923 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 RAP2CQ9Y3L5 183 aa20.08■□□□□ 0.81
C9orf3-213ENST00000471978 FCMRO60667 390 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 SLC7A1P30825 629 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 RPL14P50914 215 aaKnown RBP20.07■□□□□ 0.8
C9orf3-213ENST00000471978 ZNF141Q15928 474 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 ARHGAP11BQ3KRB8 267 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 TFAP2EQ6VUC0 442 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 ZNF704Q6ZNC4 412 aaPredicted RBP20.07■□□□□ 0.8
C9orf3-213ENST00000471978 PLEKHM3Q6ZWE6 761 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 Q71RC1 249 aaPredicted RBP20.07■□□□□ 0.8
C9orf3-213ENST00000471978 STEAP2Q8NFT2 490 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 PLPPR2Q96GM1 343 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 THUMPD3Q9BV44 507 aaKnown RBP20.07■□□□□ 0.8
C9orf3-213ENST00000471978 GP6Q9HCN6 339 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 SSU72Q9NP77 194 aaKnown RBP20.07■□□□□ 0.8
C9orf3-213ENST00000471978 KCNE5Q9UJ90 142 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 MKLN1Q9UL63 735 aa20.07■□□□□ 0.8
C9orf3-213ENST00000471978 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.07■□□□□ 0.8
C9orf3-213ENST00000471978 RAI1Q7Z5J4 1906 aaPredicted RBP20.06■□□□□ 0.8
C9orf3-213ENST00000471978 A0A1W2PNR3 127 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 ESPNB1AK53 854 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 TM9SF1O15321 606 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 GCM2O75603 506 aaPredicted RBP20.06■□□□□ 0.8
C9orf3-213ENST00000471978 CYP7B1O75881 506 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 YES1P07947 543 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 SLC1A6P48664 564 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 CASP9P55211 416 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 LTBQ06643 244 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 SKP2Q13309 424 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 ALKBH2Q6NS38 261 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 PRSS57Q6UWY2 283 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 CLEC9AQ6UXN8 241 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 OLIG3Q7RTU3 272 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 C16orf62Q7Z3J2 963 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 YTHDF3Q7Z739 585 aaKnown RBP20.06■□□□□ 0.8
C9orf3-213ENST00000471978 ANKRD46Q86W74 232 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 GABRG1Q8N1C3 465 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 SLC43A2Q8N370 569 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 ARL8AQ96BM9 186 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 S100PBPQ96BU1 408 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 HDHD5Q9BXW7 423 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 LAT2Q9GZY6 243 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 OR51I1Q9H343 314 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 EXD2Q9NVH0 621 aa20.06■□□□□ 0.8
C9orf3-213ENST00000471978 DSCAMO60469 2012 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 IGHV3-15A0A0B4J1V0 119 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 CENPVL1A0A0U1RR11 272 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 PRSS51A0A1B0GVH4 220 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 ETV2O00321 342 aaPredicted RBP20.05■□□□□ 0.8
C9orf3-213ENST00000471978 UGT2B17O75795 530 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 SNUPNO95149 360 aaKnown RBP20.05■□□□□ 0.8
C9orf3-213ENST00000471978 CPSF4O95639 269 aaKnown RBP20.05■□□□□ 0.8
C9orf3-213ENST00000471978 PLAUP00749 431 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 ENPP1P22413 925 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 RAC3P60763 192 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 TIGD2Q4W5G0 525 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 ANXA8L1Q5VT79 327 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 MIPOL1Q8TD10 442 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 Q96MF0 132 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 SORT1Q99523 831 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 PARD6BQ9BYG5 372 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 ZNF350Q9GZX5 532 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 CENPHQ9H3R5 247 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 HEATR5AQ86XA9 2040 aa20.05■□□□□ 0.8
C9orf3-213ENST00000471978 ZANQ9Y493 2812 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 SCN2BO60939 215 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 AGR2O95994 175 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 CSTAP01040 98 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 UBTFL6P0CB48 400 aaPredicted RBP20.04■□□□□ 0.8
C9orf3-213ENST00000471978 DHRS4L1P0CG22 281 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 OR12D1P0DN82 309 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 BGNP21810 368 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 UQCRC2P22695 453 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 PHC1P78364 1004 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 TSC22D1Q15714 1073 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 SFRP5Q5T4F7 317 aa20.04■□□□□ 0.8
C9orf3-213ENST00000471978 ATAD3BQ5T9A4 648 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms