RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 NEURL3Q96EH8 262 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 MARK4Q96L34 752 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 CCDC115Q96NT0 180 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 SLC39A3Q9BRY0 314 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 INPP5KQ9BT40 448 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 MANSC1Q9H8J5 431 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 KLHL28Q9NXS3 571 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 C6orf203Q9P0P8 240 aaPredicted RBP16.84■□□□□ 0.29
COMMD1-207ENST00000471704 BTNL2Q9UIR0 455 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 PCDHGB4Q9UN71 923 aa16.84■□□□□ 0.29
COMMD1-207ENST00000471704 SERINC4A6NH21 518 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 DUXAA6NLW8 204 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 KIAA0513O60268 411 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 SS18L1O75177 396 aaPredicted RBP16.83■□□□□ 0.28
COMMD1-207ENST00000471704 AK1P00568 194 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 UBL4AP11441 157 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 CRYGSP22914 178 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 ELK4P28324 431 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 S100A3P33764 101 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 SKP2Q13309 424 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 SLC25A53Q5H9E4 307 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 PRR14LQ5THK1 2151 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 TYW3Q6IPR3 259 aaKnown RBP16.83■□□□□ 0.28
COMMD1-207ENST00000471704 PPP4R4Q6NUP7 873 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 ESPNLQ6ZVH7 1005 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 FAM214BQ7L5A3 538 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 KLHL15Q96M94 604 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 SLC35A5Q9BS91 424 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 SRXN1Q9BYN0 137 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 COQ10BQ9H8M1 238 aa16.83■□□□□ 0.28
COMMD1-207ENST00000471704 DSCAMO60469 2012 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 RAI1Q7Z5J4 1906 aaPredicted RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 C16orf97H3BN30 126 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 H3BNH8 94 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 GTPBP1O00178 669 aaKnown RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 ETV2O00321 342 aaPredicted RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 ZNF264O43296 627 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 EIF4E2O60573 245 aaKnown RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 DNAJA2O60884 412 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 STX11O75558 287 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 NUDT14O95848 222 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 PGRP06401 933 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 FCGR2AP12318 317 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 POU2F1P14859 743 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 LOXP28300 417 aaPredicted RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 ADH6P28332 368 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 SFTPDP35247 375 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 EIF1P41567 113 aaKnown RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 AP1ARQ63HQ0 302 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 ATG16L1Q676U5 607 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 HBMQ6B0K9 141 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 FRRS1Q6ZNA5 592 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 C22orf34Q6ZV56 151 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 C16orf62Q7Z3J2 963 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 LSRQ86X29 649 aaPredicted RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 OR5W2Q8NH69 310 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 RFWD2Q8NHY2 731 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 OR52B2Q96RD2 323 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 SAP130Q9H0E3 1048 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 PLSCR4Q9NRQ2 329 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 SLC6A13Q9NSD5 602 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 NKIRAS1Q9NYS0 192 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 ZNF226Q9NYT6 803 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 STOML1Q9UBI4 398 aa16.82■□□□□ 0.28
COMMD1-207ENST00000471704 GPC6Q9Y625 555 aaPredicted RBP16.82■□□□□ 0.28
COMMD1-207ENST00000471704 TRPC5OSA6NMA1 111 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 HMGN4O00479 90 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 QPRTQ15274 297 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 ZNF239Q16600 458 aaKnown RBP16.81■□□□□ 0.28
COMMD1-207ENST00000471704 HMGN2P46Q86SG4 172 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 TMCO5AQ8N6Q1 288 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 FAM71CQ8NEG0 241 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 VPS37AQ8NEZ2 397 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 XAGE5Q8WWM1 108 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 ROBO4Q8WZ75 1007 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 OSTF1Q92882 214 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 ROPN1LQ96C74 230 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 ZG16BQ96DA0 208 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 GMPPAQ96IJ6 420 aaPredicted RBP16.81■□□□□ 0.28
COMMD1-207ENST00000471704 PIP5K1AQ99755 562 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 MED18Q9BUE0 208 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 PRRG4Q9BZD6 226 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 LAT2Q9GZY6 243 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 EXD2Q9NVH0 621 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 PAQR5Q9NXK6 330 aaPredicted RBP16.81■□□□□ 0.28
COMMD1-207ENST00000471704 MCTS1Q9ULC4 181 aaKnown RBP16.81■□□□□ 0.28
COMMD1-207ENST00000471704 PROCRQ9UNN8 238 aa16.81■□□□□ 0.28
COMMD1-207ENST00000471704 CCDC154A6NI56 674 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 KLF11O14901 512 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 GSNP06396 782 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 GUSBP08236 651 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 ME2P23368 584 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 CHI3L1P36222 383 aaPredicted RBP16.8■□□□□ 0.28
COMMD1-207ENST00000471704 PGM1P36871 562 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 KHKP50053 298 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 NKX6-1P78426 367 aaPredicted RBP16.8■□□□□ 0.28
COMMD1-207ENST00000471704 CBFBQ13951 182 aa16.8■□□□□ 0.28
COMMD1-207ENST00000471704 PDCD4Q53EL6 469 aaKnown RBP16.8■□□□□ 0.28
COMMD1-207ENST00000471704 AGBL2Q5U5Z8 902 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms