RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 OR1Q1Q15612 314 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ENTPD8Q5MY95 495 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 C1QL3Q5VWW1 255 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 SLC6A19Q695T7 634 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 RPUSD3Q6P087 351 aaKnown RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 AAGABQ6PD74 315 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 GDF7Q7Z4P5 450 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 KRT73Q86Y46 540 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 PLCZ1Q86YW0 608 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ZDHHC21Q8IVQ6 265 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 TMEM251Q8N6I4 163 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF527Q8NB42 609 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 TOR1AIP2Q8NFQ8 470 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 B4GALNT2Q8NHY0 566 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 VANGL1Q8TAA9 524 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 PHOSPHO1Q8TCT1 267 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 GEMIN6Q8WXD5 167 aaKnown RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 C1GALT1C1Q96EU7 318 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 SLC47A1Q96FL8 570 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 SH3YL1Q96HL8 342 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 PTDSS2Q9BVG9 487 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 SPATA5L1Q9BVQ7 753 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 OR2B2Q9GZK3 357 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF703Q9H7S9 590 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ZDHHC11Q9H8X9 412 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 NMNAT1Q9HAN9 279 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ZFP64Q9NPA5 681 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 MEPEQ9NQ76 525 aaPredicted RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 SACM1LQ9NTJ5 587 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 ADPRHL2Q9NX46 363 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 TUBD1Q9UJT1 453 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 OSGIN1Q9UJX0 560 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 RPS6KA6Q9UK32 745 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 MRTO4Q9UKD2 239 aaKnown RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 BAG5Q9UL15 447 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 C15orf41Q9Y2V0 281 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 MRPS18CQ9Y3D5 142 aaKnown RBP8.96□□□□□ -0.98
SF3A1-207ENST00000471342 AP4S1Q9Y587 144 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 PCDHGB7Q9Y5F8 929 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 LIPGQ9Y5X9 500 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 LYVE1Q9Y5Y7 322 aa8.96□□□□□ -0.98
SF3A1-207ENST00000471342 TLN1Q9Y490 2541 aaKnown RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 A0A087WUU8 490 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 TRBV4-1A0A0J9YWV2 114 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 A0A1W2PRQ8 180 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 ZC3H12DA2A288 527 aaKnown RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 SCDO00767 359 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 GNB5O14775 395 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 CASQ2O14958 399 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 HPNP05981 417 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 TSPAN19P0C672 248 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 RHCEP18577 417 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 RFC3P40938 356 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 TMED10P49755 219 aaKnown RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 SUMO3P55854 103 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 FXYD6P3P58550 94 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 OC90Q02509 493 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 DGCR6Q14129 220 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 LARS2Q15031 903 aaKnown RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 QPRTQ15274 297 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 ATP6AP1Q15904 470 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 CTU2Q2VPK5 515 aaKnown RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 CMPK2Q5EBM0 449 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF766Q5HY98 468 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 BROXQ5VW32 411 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 LRRC69Q6ZNQ3 347 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 PLEKHM3Q6ZWE6 761 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 TRILQ7L0X0 811 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.95□□□□□ -0.98
SF3A1-207ENST00000471342 AMIGO2Q86SJ2 522 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 SPATA24Q86W54 205 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 MISPQ8IVT2 679 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 OFCC1Q8IZS5 231 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 SLC7A13Q8TCU3 470 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 ADAMTS16Q8TE57 1224 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 SLC38A4Q969I6 547 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 ADGRG7Q96K78 797 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 PRRC1Q96M27 445 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 MCHR1Q99705 422 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 SLC29A1Q99808 456 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 FAM173AQ9BQD7 235 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 TTTY12Q9BZ98 90 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 KLHL1Q9NR64 748 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 CTPS2Q9NRF8 586 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 WDR70Q9NW82 654 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 RHCGQ9UBD6 479 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 TEKT2Q9UIF3 430 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 ZNF232Q9UNY5 417 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 NCKAP5O14513 1909 aa8.95□□□□□ -0.98
SF3A1-207ENST00000471342 A0A087WUJ7 227 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 CPSF4LA6NMK7 179 aaKnown RBP8.94□□□□□ -0.98
SF3A1-207ENST00000471342 FTCDNL1E5RQL4 147 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 TP53I11O14683 189 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 HCRTR2O43614 444 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 IFNA14P01570 189 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 IGHG3P01860 377 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 KLK2P20151 261 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 MSX1P28360 303 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 SLC1A3P43003 542 aa8.94□□□□□ -0.98
SF3A1-207ENST00000471342 OMPP47874 163 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms