RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 NEBLO76041 1014 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 JCHAINP01591 159 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 VIMP08670 466 aaKnown RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 CISD3P0C7P0 127 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ETS1P14921 441 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 BCL3P20749 454 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SFTPDP35247 375 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 FDFT1P37268 417 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 HSPA9P38646 679 aaKnown RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SNU13P55769 128 aaKnown RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SARNPP82979 210 aaKnown RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 CDK16Q00536 496 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 IL1RL1Q01638 556 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ACSM1Q08AH1 577 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 HTR4Q13639 388 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 RUNX3Q13761 415 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 PRPSAP1Q14558 356 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ZNF273Q14593 569 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 PPA1Q15181 289 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 HSP90AA5PQ58FG0 334 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 MARC1Q5VT66 337 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ABRAXAS1Q6UWZ7 409 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 PPP1R21Q6ZMI0 780 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ADCK1Q86TW2 530 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 TIGD4Q8IY51 512 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SLC22A15Q8IZD6 547 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ZNF567Q8N184 647 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 TEX26Q8N6G2 289 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 TCEANCQ8N8B7 351 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 DCAF4L2Q8NA75 395 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 OR52K2Q8NGK3 314 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 IFT81Q8WYA0 676 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 FGF14Q92915 247 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ART4Q93070 314 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ISG20Q96AZ6 181 aaKnown RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SNF8Q96H20 258 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 LINC00615Q96LM1 132 aaPredicted RBP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 PLA2G2FQ9BZM2 168 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 C10orf88Q9H8K7 445 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 ECT2Q9H8V3 914 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 TRPV5Q9NQA5 729 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 RBM22Q9NW64 420 aaKnown RBP eCLIP4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SEPT10Q9P0V9 454 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 DEC1Q9P2X7 70 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 GGA2Q9UJY4 613 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 FBXL4Q9UKA2 621 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 SNX24Q9Y343 169 aa4.3□□□□□ -1.72
CCDC39-202ENST00000471307 F5P12259 2224 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 ATRXP46100 2492 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 NYNRINQ9P2P1 1898 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 KIF26AQ9ULI4 1882 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 UQCRHLA0A096LP55 91 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 NKX6-3A6NJ46 265 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 AP3B1O00203 1094 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 DYNC1I1O14576 645 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 DNALI1O14645 258 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 SPRY1O43609 319 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 NOL3O60936 208 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 ERLIN1O75477 346 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 HPP00738 406 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 EPOP01588 193 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 UQCRHP07919 91 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 GP9P14770 177 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 POLR2EP19388 210 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 TPSB2P20231 275 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 ACHEP22303 614 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 PKLRP30613 574 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 GDI1P31150 447 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CD70P32970 193 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CSKP41240 450 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CASP3P42574 277 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 MAGEA6P43360 314 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CSNK1DP48730 415 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 GEMP55040 296 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 PLTPP55058 493 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 MRPS25P82663 173 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 SLC10A7Q0GE19 358 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 ZNF235Q14590 738 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CYTH1Q15438 398 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 TRIP13Q15645 432 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 TPSAB1Q15661 275 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CYB5D1Q6P9G0 228 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CPEB2Q7Z5Q1 589 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 LINC00523Q86TU6 105 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 APCDD1Q8J025 514 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 LRTM2Q8N967 370 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 SUMF1Q8NBK3 374 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 OR52B6Q8NGF0 335 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 CCDC110Q8TBZ0 833 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 WFDC5Q8TCV5 224 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 SPSB1Q96BD6 273 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 PSKH2Q96QS6 385 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 POLR1EQ9GZS1 481 aaKnown RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 SLC25A51Q9H1U9 297 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 ABCG8Q9H221 673 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 GBA3Q9H227 469 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 DPH5Q9H2P9 285 aa4.29□□□□□ -1.72
CCDC39-202ENST00000471307 C8orf33Q9H7E9 229 aaPredicted RBP4.29□□□□□ -1.72
CCDC39-202ENST00000471307 PDFQ9HBH1 243 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms