RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SIDT1Q9NXL6 827 aaKnown RBP7.41□□□□□ -1.22
SMC4-212ENST00000470240 TEKT2Q9UIF3 430 aa7.41□□□□□ -1.22
SMC4-212ENST00000470240 ZNF221Q9UK13 617 aa7.41□□□□□ -1.22
SMC4-212ENST00000470240 MMP17Q9ULZ9 603 aa7.41□□□□□ -1.22
SMC4-212ENST00000470240 CARD8Q9Y2G2 431 aa7.41□□□□□ -1.22
SMC4-212ENST00000470240 GPR55Q9Y2T6 319 aaPredicted RBP7.41□□□□□ -1.22
SMC4-212ENST00000470240 DOCK9Q9BZ29 2069 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 HTR3EA5X5Y0 456 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CDHR4A6H8M9 788 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 OR5K3A6NET4 321 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 ZNF860A6NHJ4 632 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 FAM25AB3EWG3 89 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 FAM25CB3EWG5 89 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 FAM25GB3EWG6 89 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 WWP2O00308 870 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 FGF17O60258 216 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 PIP5K1CO60331 668 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 BRINP1O60477 761 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 PRAMEF2O60811 474 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 PPM1BO75688 479 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 APOL3O95236 402 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 EML2O95834 649 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SERPINA3P01011 423 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 LIMS3P0CW19 117 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 LIMS4P0CW20 117 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SLC2A2P11168 524 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 IL7P13232 177 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CELP19835 753 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 AZGP1P25311 298 aaKnown RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 CASP3P42574 277 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 MTNR1BP49286 362 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 GPR143P51810 404 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SLC16A1P53985 500 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 VSX2P58304 361 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 UBE2IP63279 158 aaKnown RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 HOXC5Q00444 222 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 ID2Q02363 134 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 HHEXQ03014 270 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 C19orf57Q0VDD7 668 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 BIKQ13323 160 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 ASAH1Q13510 395 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 QPRTQ15274 297 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 TAB1Q15750 504 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 LRIT3Q3SXY7 679 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 KLHL12Q53G59 568 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CCNJQ5T5M9 372 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 FHL5Q5TD97 284 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 GARNL3Q5VVW2 1013 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 AGAP6Q5VW22 663 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 PEAR1Q5VY43 1037 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 PLBD1Q6P4A8 553 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CD200R1LQ6Q8B3 271 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SMARCD3Q6STE5 483 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 ZNF322Q6U7Q0 402 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 PAMR1Q6UXH9 720 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 NCCRP1Q6ZVX7 275 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 TMPRSS11FQ6ZWK6 438 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SHFQ7M4L6 423 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 WDR53Q7Z5U6 358 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 ABI3BPQ7Z7G0 1075 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 LHFPL3Q86UP9 236 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 GATAD2AQ86YP4 633 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CPOQ8IVL8 374 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 LAX1Q8IWV1 398 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 LNX2Q8N448 690 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 FAM181AQ8N9Y4 354 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 OR10H4Q8NGA5 316 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 OR51G2Q8NGK0 314 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CCL4L1Q8NHW4 92 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SPRYD4Q8WW59 207 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 OIT3Q8WWZ8 545 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 ASB15Q8WXK1 588 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 NACC2Q96BF6 587 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 BPIFA2Q96DR5 249 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 AGAP4Q96P64 663 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 DGAT2Q96PD7 388 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 GPA33Q99795 319 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 ALG8Q9BVK2 526 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 TMED9Q9BVK6 235 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 RSPO3Q9BXY4 272 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 BARHL1Q9BZE3 327 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 DPH1Q9BZG8 443 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 S1PR5Q9H228 398 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 MKKSQ9NPJ1 570 aaPredicted RBP7.4□□□□□ -1.22
SMC4-212ENST00000470240 CMC2Q9NRP2 79 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 C14orf119Q9NWQ9 140 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CLDND1Q9NY35 253 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 MAT2BQ9NZL9 334 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 KLHL21Q9UJP4 597 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CBLCQ9ULV8 474 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CA5BQ9Y2D0 317 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SLC35A3Q9Y2D2 325 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 PCDHGB7Q9Y5F8 929 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 CSNK1G3Q9Y6M4 447 aa7.4□□□□□ -1.22
SMC4-212ENST00000470240 SNRNP200O75643 2136 aaKnown RBP7.4□□□□□ -1.23
SMC4-212ENST00000470240 FANCMQ8IYD8 2048 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 LOC105369274A0A096LPK9 316 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 LOC102723532A0A0G2JNH3 316 aa7.39□□□□□ -1.23
SMC4-212ENST00000470240 SCO2A0A1W2PP80 73 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms