RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 SPATA19Q7Z5L4 167 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 ZBED8Q8IZ13 594 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 ZDHHC22Q8N966 263 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 C1orf162Q8NEQ5 155 aaPredicted RBP10.44□□□□□ -0.74
LSM2-209ENST00000470083 ATP6V1C2Q8NEY4 427 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 OR4F6Q8NGB9 312 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 PIK3R3Q92569 461 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 HOXB13Q92826 284 aaPredicted RBP10.44□□□□□ -0.74
LSM2-209ENST00000470083 CPSF2Q9P2I0 782 aaKnown RBP10.44□□□□□ -0.74
LSM2-209ENST00000470083 PCTPQ9UKL6 214 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 SNX6Q9UNH7 406 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 WBP11Q9Y2W2 641 aaKnown RBP10.44□□□□□ -0.74
LSM2-209ENST00000470083 PTGDR2Q9Y5Y4 395 aa10.44□□□□□ -0.74
LSM2-209ENST00000470083 GPC6Q9Y625 555 aaPredicted RBP10.44□□□□□ -0.74
LSM2-209ENST00000470083 GNG14A0A1W2PPG7 69 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 A0A1W2PQD3 144 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 FAM159BA6NKW6 160 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 PDLIM1O00151 329 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 TP73O15350 636 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 OR4A8P0C604 315 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 LCN1P31025 176 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 FOXG1P55316 489 aaPredicted RBP10.43□□□□□ -0.74
LSM2-209ENST00000470083 TRADDQ15628 312 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 GRTP1Q5TC63 336 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 ABLIM2Q6H8Q1 611 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 CCDC91Q7Z6B0 441 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 MMGT1Q8N4V1 131 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 PTGR2Q8N8N7 351 aaPredicted RBP10.43□□□□□ -0.74
LSM2-209ENST00000470083 ACTRT1Q8TDG2 376 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 GPR151Q8TDV0 419 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 C16orf78Q8WTQ4 265 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 WDR60Q8WVS4 1066 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 ELP4Q96EB1 424 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 MRGPRX4Q96LA9 322 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 NSUN5Q96P11 429 aaKnown RBP10.43□□□□□ -0.74
LSM2-209ENST00000470083 LRRC37BQ96QE4 947 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 SLC17A5Q9NRA2 495 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 UBQLN4Q9NRR5 601 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 MED29Q9NX70 200 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 NFU1Q9UMS0 254 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 NOSIPQ9Y314 301 aaKnown RBP10.43□□□□□ -0.74
LSM2-209ENST00000470083 ACTL7BQ9Y614 415 aa10.43□□□□□ -0.74
LSM2-209ENST00000470083 TCRBV9S1A1TA0A576 114 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 SCDO00767 359 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 SEC31AO94979 1220 aaKnown RBP10.42□□□□□ -0.74
LSM2-209ENST00000470083 NKX2-2O95096 273 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 NUDT14O95848 222 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 PNPP00491 289 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 IFI6P09912 130 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 HSD3B1P14060 373 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 DDCP20711 480 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 HSD3B2P26439 372 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 SSTR1P30872 391 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 MAP3K8P41279 467 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 SUMO3P55854 103 aaPredicted RBP10.42□□□□□ -0.74
LSM2-209ENST00000470083 RAE1P78406 368 aaKnown RBP10.42□□□□□ -0.74
LSM2-209ENST00000470083 ZNF117Q03924 483 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 PDK3Q15120 406 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 VPS26BQ4G0F5 336 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 LETMD1Q6P1Q0 360 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 C1orf229Q6ZS94 237 aaPredicted RBP10.42□□□□□ -0.74
LSM2-209ENST00000470083 CYS1Q717R9 158 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 ZAR1Q86SH2 424 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 OR51F2Q8NH61 342 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 UBASH3BQ8TF42 649 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 SLC6A7Q99884 636 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 GLIPR2Q9H4G4 154 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 UNKLQ9H9P5 680 aaKnown RBP10.42□□□□□ -0.74
LSM2-209ENST00000470083 LPAR2Q9HBW0 351 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 EQTNQ9NQ60 294 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 DCTN4Q9UJW0 460 aa10.42□□□□□ -0.74
LSM2-209ENST00000470083 LOC105371242A0A075B767 164 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 KCNK2O95069 426 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 ALX3O95076 343 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 BCL10O95999 233 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 OTCP00480 354 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 TFP02787 698 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 PRKCAP17252 672 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 ZFP36P26651 326 aaKnown RBP10.41□□□□□ -0.74
LSM2-209ENST00000470083 TYK2P29597 1187 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 NTSP30990 170 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 NTF4P34130 210 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 SLC1A3P43003 542 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 PRPS1P60891 318 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 TGFBR3Q03167 851 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 TOMM34Q15785 309 aaPredicted RBP10.41□□□□□ -0.74
LSM2-209ENST00000470083 PRSS53Q2L4Q9 553 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 FAHD2BQ6P2I3 314 aaPredicted RBP10.41□□□□□ -0.74
LSM2-209ENST00000470083 KLC3Q6P597 504 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 IKBIPQ70UQ0 350 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 CTAGE3PQ8IX95 158 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 BPIFB2Q8N4F0 458 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 OR6Y1Q8NGX8 325 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 CLDND2Q8NHS1 167 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 PYROXD1Q8WU10 500 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 PHF21BQ96EK2 531 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 FAHD2AQ96GK7 314 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 AMDHD1Q96NU7 426 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 GPR78Q96P69 363 aa10.41□□□□□ -0.74
LSM2-209ENST00000470083 OR5B2Q96R09 309 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms